FC877265
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877265 vs. ExPASy Swiss-Prot
Match: ZC3HF_DANRE (Zinc finger CCCH domain-containing protein 15 OS=Danio rerio GN=zc3h15 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYV-----------QNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKXGQC 370 MPPK+ + K + KK+KI+EDKTFGLKNK +K QK++ QN +Q + +++K LN+LFK V+ KV GVDPKS+LC F+K GQC Sbjct: 1 MPPKKPAPAAANKKTQEKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTQQVKFGQQNARQIAAAESEKTK-----KKDDKKKELSELNELFKPVVAAQKVSKGVDPKSVLCAFFKQGQC 113
BLAST of FC877265 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.540e-13 Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 65 MPPKQQS-------KAELAKKQKIVEDKTFGLKNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKXGQC 370 MPPK+Q KA+ KK+KI+EDKTFGLKNK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DPKS++C F+K GQC Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQC 114
BLAST of FC877265 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12 Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 62 KMPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQ-----PKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKXGQC 370 K PP K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ P+ D K L +FK V KV G DPKS++C F+K G C Sbjct: 5 KAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMAL--IFK-PVQTQKVEKGTDPKSVVCAFFKQGTC 108
BLAST of FC877265 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEEL (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 65 MPPKQQS---KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKXGQC 370 MPPKQQ K+E +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNKN-QKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLC 104
BLAST of FC877265 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11 Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 2 Query: 65 MPPKQ-----QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQP---KPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKXGQC 370 MPPK+ K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ P Q + +FK V KV G DPKS++C F+K G C Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQAGGHHPRQDGDKKKDEKEKKLADLREMASIFK-PVQTQKVDKGTDPKSVVCAFFKQGLC 108
BLAST of FC877265 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEBR (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.942e-11 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 2 Query: 65 MPPKQ--QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKXGQC 370 MPPKQ KAE +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQVRNNNTRMDLVRQQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLC 103 The following BLAST results are available for this feature:
BLAST of FC877265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877265 ID=FC877265; Name=FC877265; organism=Citrus clementina; type=EST; length=373bpback to top |