FC877271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: PDIA6_RAT (Protein disulfide-isomerase A6 OS=Rattus norvegicus GN=Pdia6 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.156e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 302 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTA 598 +V +TD T+ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGI+ PT+ IF+ GE G +S + + Sbjct: 161 DVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: PDIA6_MOUSE (Protein disulfide-isomerase A6 OS=Mus musculus GN=Pdia6 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.156e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 302 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTA 598 +V +TD T+ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGI+ PT+ IF+ GE G +S + + Sbjct: 161 DVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11 Identity = 29/76 (38.16%), Postives = 49/76 (64.47%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 574 ++G V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT + K+G + D V+GA Sbjct: 26 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGA 100
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11 Identity = 29/76 (38.16%), Postives = 49/76 (64.47%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 574 ++G V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT + K+G + D V+GA Sbjct: 26 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGA 100
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: PDIA6_PONAB (Protein disulfide-isomerase A6 OS=Pongo abelii GN=PDIA6 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 302 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTA 598 +V +TD ++ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGIR PT+ IF+ GE G +S + + Sbjct: 161 DVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: PDIA6_HUMAN (Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.510e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 2 Query: 302 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTA 598 +V +TD ++ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGIR PT+ IF+ GE G +S + + Sbjct: 161 DVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.972e-11 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 284 AQETAVEVPAVTDATWQSLVL---DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 A E + T TW + +S + V+V+F A WCGPCR I P +L+K+ L KV+TDE S+A+ + I+++PT M K G+ D V+GA K L ++I K L Sbjct: 2 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL-FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 113
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.972e-11 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 574 D+ ++++F+A WCGPCRMI PI ++ S +Y G KVN D + I RY I ++PT + KN ++ D V GA Sbjct: 20 DANRLIIIDFFANWCGPCRMISPIFEQFSAEY-GNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGA 94
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.363e-11 Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 329 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG-KLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 586 W S + SG + V+ +A WCGPC+ I P+ +L+ +Y K KVN DE IA+ G++++PT + F+NG++ D + GA P++ Sbjct: 12 WISTIPKSGY-LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQA 97
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.392e-11 Identity = 27/76 (35.53%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 574 DSG ++++F A WCGPCR+I P + EL+K++ + +KV+ D+ +A Y + ++P+ +I K G++ + ++GA Sbjct: 25 DSGKLIVIDFTASWCGPCRVITPYVSELAKKF-PHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGA 99 The following BLAST results are available for this feature:
BLAST of FC877271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877271 ID=FC877271; Name=FC877271; organism=Citrus clementina; type=EST; length=657bpback to top |