FC877271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_RICCN (Thioredoxin OS=Rickettsia conorii GN=trxA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.503e-27 Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 V D++++ VL+S PVLV+FWA WCGPC+M+ PIIDE+SK+ GK+K K+N DE+P+ + YGIRSIPT+M+FKNGE+KDT IG K++L I K Sbjct: 5 VMDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_RICPR (Thioredoxin OS=Rickettsia prowazekii GN=trxA PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.372e-27 Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 VTD+++++ VL+S PV+V+FWA WCGPC+M+ PIIDE+SK+ K+K K+N DE+P + YGIRSIPT+M+FKNGE+KDT IG K++L I K Sbjct: 5 VTDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_STRAU (Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.710e-27 Identity = 53/101 (52.48%), Postives = 77/101 (76.24%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 VT+AT++S VL+S PVLV F PWCGPC+M+ P++DE++ +Y GK+K KVNTDE+P +A++YG+RSIPT ++FK GE ++GA PK+ L A ++ L Sbjct: 6 VTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQLASQYGVRSIPTRLMFKGGEVAANMVGAAPKTRLAAFLDASL 106
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_RICTY (Thioredoxin OS=Rickettsia typhi GN=trxA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.272e-26 Identity = 54/99 (54.55%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 VTD ++++ VL+S PV+V+FWA WCGPC+M+ PIIDE+SK+ K+K K+N DE+P + YG+RSIPT+M+FKNGE+KDT IG K +L I K Sbjct: 5 VTDISFKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGVRSIPTIMLFKNGEQKDTKIGLQQKKSLLDWINK 103
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXM3_ARATH (Thioredoxin M-type 3, chloroplastic OS=Arabidopsis thaliana GN=At2g15570 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.170e-26 Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 2 Query: 275 VCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +C A EV T +W+ VL S +PVLVEF+ WCGPCRM+H IIDE++ Y GKL CY +N D +A Y I+++P V++FKNGEK+++++G +PK ++IE+ L Sbjct: 61 LCVRDSRAAEV---TQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_RICBR (Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.834e-26 Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTD +++ VL S PVLV+FWA WC PCRM+ PII+E+SK K+K K+N DE+P I ++YGIRSIPTVM+FKNGE+KDT +G K++L Sbjct: 5 VTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPSKYGIRSIPTVMLFKNGEQKDTKVGLHQKNSL 97
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_PASMU (Thioredoxin OS=Pasteurella multocida GN=trxA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.092e-25 Identity = 51/104 (49.04%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 299 VEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 +EV TDAT+ + V++S PVL++FWAPWCGPCRMI PI+DE++ ++ GK+K K+N DE+ + + G+RSIPT+++FKNG+ T +GA+PK+ L I + Sbjct: 1 MEVLHSTDATFTADVVNSDVPVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDENQATPAQLGVRSIPTLVLFKNGKAVATQVGALPKNQLANFINQ 104
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_HAEIN (Thioredoxin OS=Haemophilus influenzae GN=trxA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25 Identity = 46/105 (43.81%), Postives = 78/105 (74.29%), Query Frame = 2 Query: 302 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 EV + DA ++S+V++S P+L++FWAPWCGPC+MI P++DEL+ ++ GK+K K+N D++ + ++G+RSIPT+++ KNG+ T +GA+PK+ L I + + Sbjct: 3 EVLHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI 107
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_PSEAE (Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24 Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIE 607 VTDA+++ VL + PVLV++WA WCGPC+MI P++DE+++ Y GKLK K+N DE+ +YG+R IPT+M+FK+G + T +GA+ KS L A ++ Sbjct: 8 VTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLD 105
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5) HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24 Identity = 48/100 (48.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 317 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 TD +Q+ +LDS VLV+FWA WCGPC M+ P+I++L+ Y GK K+N DE+P+IA +YGIRSIPT++I K G+ D ++GA+PK+ + I++ + Sbjct: 8 TDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHI 107 The following BLAST results are available for this feature:
BLAST of FC877271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877271 ID=FC877271; Name=FC877271; organism=Citrus clementina; type=EST; length=657bpback to top |