FC877271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_CHLTE (Thioredoxin-2 OS=Chlorobium tepidum GN=trx2 PE=3 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.483e-22 Identity = 45/100 (45.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 317 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 TD +Q+ +L+S LV+FWA WCGPC M+ P+I+EL+ Y GK K+N DE+P+ A +YGIRSIPT++I K G+ D ++GA+PK+ + +++ + Sbjct: 9 TDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKLDEHI 108
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22 Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 VTD +++ VL + PVLV+FWA WCGPCR I P ++ ++ +Y K++ K+N DE+P A +YG+ SIPT+ +++ GE T++GA PK+ + +E F+ Sbjct: 8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 108
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_CHLAA (Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trxA PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.609e-21 Identity = 46/101 (45.54%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V D+ + VL S +PV+V+FWAPWCGPCR+I PI+D+L+ +Y G+L KVNTD++ A++ GI+ IPT++IFK+G + ++GA P++ +K L Sbjct: 7 VHDSDFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQYASQLGIQGIPTLVIFKDGREVGRLVGARPEAMYREIFDKVL 107
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_CORNE (Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21 Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = 2 Query: 317 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 TD +Q+ VLD+ +PVLV+FWA WC PC+ I P+++ELS +Y GK+K KV+ A +Y IR+IP +++FK+GE +GA P+S L A I++ Sbjct: 9 TDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKYNIRNIPALLMFKDGEVVAQQVGAAPRSKLAAFIDQ 106
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 314 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_ECOLI (Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 314 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_ECOL6 (Thioredoxin-2 OS=Escherichia coli O6 GN=trxC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 314 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_ECO57 (Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 46/103 (44.66%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 314 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFKNG+ D + GAVPK+ + + + L Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL 139
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 VTDA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A +Y + SIPT+++FK+G+ D V+G PK L ++K L Sbjct: 6 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104 The following BLAST results are available for this feature:
BLAST of FC877271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877271 ID=FC877271; Name=FC877271; organism=Citrus clementina; type=EST; length=657bpback to top |