FC877271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_BUCAI (Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19 Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 +TD ++ VL+S S LV+FWA WC PC+++ PI++E+SK+Y K+ K+N +E+P+ A Y IRSIPT+++F N E T +GAV K L +++ Sbjct: 7 LTDQNFEEQVLNSKSFFLVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKLNIEENPNTAPVYSIRSIPTLLLFNNSEVLATKVGAVSKLELKEFLDE 105
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_LISMO (Thioredoxin OS=Listeria monocytogenes GN=trxA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18 Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +TDAT++ S VL +FWA WCGPCRM+ P+++E+ ++ LK K++ DE+P +G+ SIPT++I K+GE +T+IG PK L I K++ Sbjct: 2 VKEITDATFEQET--SEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_LISIN (Thioredoxin OS=Listeria innocua GN=trxA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18 Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +TDAT++ S VL +FWA WCGPCRM+ P+++E+ ++ LK K++ DE+P +G+ SIPT++I K+GE +T+IG PK L I K++ Sbjct: 2 VKEITDATFEQET--SEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.079e-17 Identity = 38/93 (40.86%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTDA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.079e-17 Identity = 38/93 (40.86%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTDA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXB_MYCLE (Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium leprae GN=trxB/A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.841e-17 Identity = 37/93 (39.78%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTDA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + +L K++ D +P +A + + SIPT+++F+ G+ ++GA K+ L Sbjct: 354 VTDASFFADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVGAKGKAAL 446
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_BUCAP (Thioredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trxA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 37/93 (39.78%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 +TD ++ VL+ S VLV+FWA WC PC+++ PI++E++++Y K+K K+N +++P+ A Y IR IP +++F E T +GA+ K L Sbjct: 7 LTDQNFEKEVLEHKSFVLVDFWAEWCNPCKILAPILEEIAQEYFNKIKVGKLNIEKNPNTAPIYSIRGIPALLLFHGREVLATKVGAISKLQL 99
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO1_CHLTE (Thioredoxin-1 OS=Chlorobium tepidum GN=trx1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16 Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 326 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 T L+ S PV ++FWA WCGPC+M+ P + +L+ ++ G+L KVN D+ P A R+ ++ IP +M+F G+ K GA+P + + K Sbjct: 4 TLDDLIRTSELPVFIDFWADWCGPCKMVAPSVKQLASEFKGRLIVVKVNVDQQPDAAARFQVQGIPALMLFVGGQLKWRTAGAIPYQQMRQEVLK 98
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_MYCSM (Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16 Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 311 AVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYK--VNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 AVTD ++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + +L K V+ D +P+ A + + SIPT+++FK+G ++GA K+ L + L Sbjct: 9 AVTDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPATARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 112
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 32/89 (35.96%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 344 LDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 +++ V+V+FWAPWCG C+M+ P+++E+ + + K+N D+ +A + + SIPT+++FK+G++ D IG V KS + I+K Sbjct: 15 IETNPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQK 103 The following BLAST results are available for this feature:
BLAST of FC877271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877271 ID=FC877271; Name=FC877271; organism=Citrus clementina; type=EST; length=657bpback to top |