FC877271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 34/98 (34.69%), Postives = 64/98 (65.31%), Query Frame = 2 Query: 323 ATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 A + ++ S PVLV+F+A WCGPC+M+ PI++++ +++ K++TD+ P+IAT+Y I+S+PT+++FK G+ + G + L ++ F+ Sbjct: 8 ANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQVFV 105
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_ANASP (Thioredoxin-2 OS=Anabaena sp. (strain PCC 7120) GN=trxB PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 V +TDA ++S VL + PVLV FWA WCGPC+++ P+I+ + Y +LK K+ D +P+ +Y + +P + + K + D+ G + K L + ++ L Sbjct: 5 VITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 108
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_SYNY3 (Thioredoxin-like protein slr1139 OS=Synechocystis sp. (strain PCC 6803) GN=slr1139 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14 Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +TDA ++ PVLV FWA WCGPCR++ P I ++K Y KLK K+ D +P+ + + +P + +FKN E T GA+ K L +++ L Sbjct: 6 ITDAEFEQETQGQTKPVLVYFWASWCGPCRLMAPAIQAIAKDYGDKLKVLKLEVDPNPAAVAQCKVEGVPALRLFKNNELVMTHEGAIAKPKLLELLKEEL 106
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 34/83 (40.96%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 362 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 VL++F+A WCGPC+M+ P+++ L + V + KVN D+ P+ A +YG+ SIPT+++FK+G++ D V+G K +L I + Sbjct: 19 VLIDFFAEWCGPCKMLTPVLESLEAE-VSSVLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQ 100
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXX_ARATH (Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.235e-13 Identity = 36/106 (33.96%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEK--KDTVIGAVPKSTLTASIEKFL 616 + + ++ + S VL+S PVLVEF A WCGPC++I+P ++ LS++Y KL K++ D +P + + + +P ++FK+G++ GA+ K+ L I+ L Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.613e-13 Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 2 Query: 308 PAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 P + A ++ V D+ PV+V+F A WCGPC+ I P +++LS+ + G ++ YKV+ DE +A G+ ++PT +K GE+ + V GA P + + A ++ L Sbjct: 5 PIKSVAEYKEKVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTG-IQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANP-AAIQAGVKAIL 105
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 34/91 (37.36%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQY-VGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +SG ++++FWA WCGPCR+I PI ++ S++Y + KV+ D + I+ IR++PT ++K+G+K D ++GA P + L + ++K L Sbjct: 16 NSGKIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANP-TALESLVQKSL 105
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13 Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 308 PAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 P + A +Q VL++ V+V+ +A WCGPC+ I P +++ ++ Y Y+++ DE +A GIR++PT ++FK+G+K V+GA P L A I+ L Sbjct: 9 PITSKAEFQEKVLNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTDA-SFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANP-GALEAGIKALL 109
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIOM_RAT (Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 32/96 (33.33%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 329 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +Q V++S +PV+V+F A WCGPC+++ P ++++ + GK+ KV+ D+ +A Y + ++PTV+ KNG+ D +G + L A ++K + Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKLI 165
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIOM_MOUSE (Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 32/96 (33.33%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 329 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +Q V++S +PV+V+F A WCGPC+++ P ++++ + GK+ KV+ D+ +A Y + ++PTV+ KNG+ D +G + L A ++K + Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKLI 165 The following BLAST results are available for this feature:
BLAST of FC877271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877271 ID=FC877271; Name=FC877271; organism=Citrus clementina; type=EST; length=657bpback to top |