FC877271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIOM_HUMAN (Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 32/96 (33.33%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 329 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +Q V++S +PV+V+F A WCGPC+++ P ++++ + GK+ KV+ D+ +A Y + ++PTV+ KNG+ D +G + L A ++K + Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEBR (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 DS ++V+F+A WCGPCRMI P + LS ++ G KVNTD + I RY I ++PT + FKN ++ D+V GA +S + ++I K Sbjct: 20 DSNRLIIVDFFANWCGPCRMISPAFERLSMEF-GNATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGA-NESAIISTIRK 105
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13 Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 2 Query: 359 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 574 P++V+F A WCGPC+MI P+ + LS Y GK+ KV+ D ++A GI ++PT ++K+G K D ++GA Sbjct: 27 PIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGA 98
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIOM_BOVIN (Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13 Identity = 32/96 (33.33%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 329 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 +Q V++S +PV+V+F A WCGPC+++ P ++++ + GK+ KV+ D+ +A Y + ++PTV+ KNG+ D +G + L A ++K + Sbjct: 70 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_DROYA (Thioredoxin-2 OS=Drosophila yakuba GN=Trx-2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 350 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 574 SG V+++F+A WCGPC+MI P + ELS QY + KV+ DE IA Y I S+PT + KNG K + GA Sbjct: 19 SGKLVVLDFFATWCGPCKMISPKLAELSTQYADTVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGA 93
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO2_CAEEL (Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 302 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKFL 616 ++ +V D T + V+ S PV+V+F A WCGPC+ + P ++E G + K+N D + +A YGI ++PTV FKNGEK G + L IE L Sbjct: 41 DIDSVEDFTEK--VIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVDHAGELAMDYGISAVPTVFAFKNGEKISGFSGVLDDEQLDDFIEDVL 143
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.365e-12 Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 347 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEK 610 +S ++++F A WC PCRMI PI ++L+K+++ +KV+ DE S+A +G+ ++PT + K GE D ++GA K L A I K Sbjct: 26 ESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGA-NKEDLQAKIVK 112
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_BORBU (Thioredoxin OS=Borrelia burgdorferi GN=trxA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.365e-12 Identity = 29/85 (34.12%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 359 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKF 613 P +++F+A WCGPC+M+ PI ++LSK+Y + YKV+TD+ I++ G++S+PT++ K +G + + I+ F Sbjct: 30 PAIIDFYANWCGPCKMLSPIFEKLSKKYENSIDFYKVDTDKEQDISSAIGVQSLPTILFIPVDGKPKVSVGFLQEDAFENIIKDF 114
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIO_PLAF7 (Thioredoxin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0545 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12 Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTASIEKF 613 V VT ++ V+V+F+A WCGPC+ I P +E SK Y K+ KV+ DE + + I S+PT ++KNG DT++GA S L IEK+ Sbjct: 2 VKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGA-NDSALKQLIEKY 102
BLAST of FC877271 vs. ExPASy Swiss-Prot
Match: THIOT_DROME (Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12 Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 332 QSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIG 571 Q L+L V+++F+A WCGPC++I P +DEL+ +Y ++ KVN DE+ I Y + S+PT + K G + +G Sbjct: 13 QQLILAEDKLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVDENEDITVEYNVNSMPTFVFIKGGNVLELFVG 92 The following BLAST results are available for this feature:
BLAST of FC877271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877271 ID=FC877271; Name=FC877271; organism=Citrus clementina; type=EST; length=657bpback to top |