FC877781

Overview
NameFC877781
Unique NameFC877781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11683 contig Ccv1_Contig11683:19..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 89/256 (34.77%), Postives = 135/256 (52.73%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYE--SFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLG-----FLDLQGNIKKM-KALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PPGP   PIIGNLH +GS PH S+  LSEKYGP+M L+FGS   VV S+ E  K +LKT DA    RP        T+N  DI + PY  YWR+ RK+  +EL++ KR++SF++ R +E+   ++ + +  S  KP  L   L  LS ++I R+V G      +LEN       +  ++     + G     D  P +G        L    +K+ KA+   FD+ ++H L++           +  D++D+LL++
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKGSKLEN------LYEEVIQGTMEVVGSFAAADYFPIIGRIIDRITGLHSKCEKIFKAMDAFFDQSIKHHLEDES---------IKDDIIDLLLKM 270          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 81/229 (35.37%), Postives = 126/229 (55.02%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTI--LKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLD-LQGNIKKMKALAKRFDKFLEHVLDEH 813
            PP P   P+IGNLH +   PHRSLH+LS +YGP+M L FG  P++V SS+E A  ILKT D  F+ RPK+ A         D+ + PYG YWRQ + +C + L + K + SFE +R +E+N  + +L ++    +   L +    L+  + SR+ LGKKY + +      T       V ++  L     +GD +P L ++D + G   K+  +++ +   +E V+ EH
Sbjct:   34 PPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLGKKYWEDE------TAGGLKKRVRQIMELLREFPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEH 256          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.101e-33
Identity = 89/259 (34.36%), Postives = 136/259 (52.51%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYES--FGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRK------GVEYYVAKDMVDVLLQLADD 888
            PP PK  PIIG+LHL+  +PH+  + LS ++GPIMQL  GS P VV S+AE AK  LKT +  FS RP    G+     +    + PYGP  +  +K+C  EL   + L+ F  +R QE   F+ R+ +    G+          LS  IISRM + +  ++ + + E     E   +V ++  L G  +V D I +L   DLQG  K+++    RFD  L+ ++ + +  R+      G   +  KD++DVLL + +D
Sbjct:   30 PPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSEDEKQAE-----EMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQF--KDILDVLLDIGED 277          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.552e-32
Identity = 89/253 (35.18%), Postives = 137/253 (54.15%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTI--LKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIP-WLGFL--DLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PPGP   PIIGNLH +G   HRS + LS++YGP+M L+FG  PVVV S+ E A+ +LKT D     RPK +A    T+N+ DI ++ YG  WR+ RK+  +ELFS K+L++F YIR +E  L + ++ ES    T+  L+  L   + +I+ R+  G+ +     E + V   +   +V E     G     D  P  LG+    + G   ++     R   F +HV+D+H    +  ++    D+V V+L +
Sbjct:   29 PPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFGQNFH----ECDFVDMDKVEELVLESETNLGSFAFIDFFPAGLGWAIDRISGQHSRLHKAFARLSNFFQHVIDDHLKPWQSEDH---SDIVGVMLDM 274          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.552e-32
Identity = 93/261 (35.63%), Postives = 136/261 (52.11%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYE--SFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQ----LENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLD-LQGNIKKMKALAKRFDKFLEHVLDEH-DARRKGVEYYVAKDMVDVLLQLADDLT 894
            PP P   P+IGNLH +G  PHR LH+LS +YGP+M L FG  PV+V S  ++   I+KT D  F+ RPK+ A         DI + PYG  W+  + +  + L + K + SFE +R +E+ +   +L E  S      L   L  L+  II R+ LG+KY +++    ++N V+T  EF           G    GD IP L ++D + G   KMK +  + D FL+ ++ EH DA  K        D +D+LL +  D T
Sbjct:   34 PPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLGRKYNEEEGGIDIKNLVMTSSEFF----------GKFFFGDFIPSLAWIDWISGIDDKMKDINNKLDCFLDSMVQEHVDADHK-----EPSDFIDMLLLIQKDKT 279          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.648e-32
Identity = 87/265 (32.83%), Postives = 147/265 (55.47%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLY------ESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQ--LENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLD--LQGNIKKMKALAKRFDKFLEHVLDEH-DARRKGVEYYVAKDMVDVLLQLADDLTL 897
            PPGP+PWP++GNL+ I  +  R     ++ YGPI+ + FGS   V+ S++E+AK +LK  D L + R ++ +    + +  D+ W+ YGP++ + RK+C++ELFS KRLE+   IR  E+   ++ +Y      E+ GK  +L+ HL  ++   I+R+  GK++ + +  ++ + V   EF A+V+    L   L + + IPWL ++    +G   K  A   R D+    ++ EH +AR+K       +  VD LL L D   L
Sbjct:   29 PPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGV---EFKAIVENGLKLGASLAMAEHIPWLRWMFPLEEGAFAKHGA---RRDRLTRAIMAEHTEARKKSGG--AKQHFVDALLTLQDKYDL 285          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.648e-32
Identity = 91/258 (35.27%), Postives = 134/258 (51.94%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLH-LIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAG-KYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIK-KMKALAKRFDKFLEHVLDEHD-------ARRKGVEYYVAKDMVDVLLQL 879
            PPGP   PI+GN H L G   H  L  L++KYGP+M LK G    +V SS ++A+ I +T D LF+ RP      K  ++++SD+  SPYG YWRQ RKI  MEL S K ++SF  IR +E+  F+  +    G    L   +S L   I +R   G+K  +          +EF  ++D+L       ++ D  P L FL L    K K++ + K+FD  +E +L  H        ++  G +    +D+VDVLL +
Sbjct:   27 PPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFGEKNKN---------TEEFIRLLDQLTKAVAEPNIADMFPSLKFLQLISTSKYKIEKIHKQFDVIVETILKGHKEKINKPLSQENGEK---KEDLVDVLLNI 272          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.314e-31
Identity = 82/250 (32.80%), Postives = 138/250 (55.20%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYE--SFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLD-LQGNIKKMKALAKRFDKFLEHVLDEH-DARRKGVEYYVAKDMVDVLL 873
            PP P   P+IGNLH +   PHRSL +LS +YGP+M L FG  P++V SS+++A  ++KT D   + RP+    +       ++ +SPYG YWRQ + +C + L + K ++SF  +R +E ++ + ++ +  S   P  L   L  L+  + SR+  GKK++++       +  +F   V ++  L G   V + IP L ++D ++G   + + ++K F   ++ V+ EH DA  K       KD VD+LL
Sbjct:   33 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFGKKHSNE------ASMSDFKNQVRKITELVGGFPVSEYIPCLAWIDQIRGLYNRAEEVSKIFGDLMDKVVQEHLDATNK-----PTKDFVDILL 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.716e-31
Identity = 84/254 (33.07%), Postives = 134/254 (52.76%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYES-FGKPTI-LKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIP--WLGFLD--LQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PP P  +P+IGNLH +G LPHRS   L+E+ G +M L FG  PV V SS E A+ +L+T D     RPK    +  +  + DI+++PYG  WR+ RK    ELF  K+++ F YI  +E NL + +L ES  G+P + L   L  L+ +I+ R+  G+ + D    N+ +   +   ++ E           D  P   LG+L   + G  + +  +  + D   + V+D+H    +  ++   KD+VDV+L +
Sbjct:   31 PPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFHD----NKFIDEDKIDELIFETETAQASFTCSDFFPIAGLGWLADWISGKHRWLNNVFFKLDALFQRVIDDHSDPGRWKDH---KDIVDVMLDV 277          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.928e-31
Identity = 81/260 (31.15%), Postives = 140/260 (53.85%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESF------GKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADDLTL 897
            PPGP+PWP++GNL  I  +  R     +E+YGP++ + FGS   VV S++E+AK +LK  D   + RP+  + +  + N  D+ W+ YGP++ + RK+C++ELF+ KRLE+   IR  E+   +  +Y +       GKP ++++HLS ++   I+R+  GK++ +   + +    +EF  +V+    +   L V + I +L +L    N +  K   +R D+    +++EH    K  E    +  VD L  L     L
Sbjct:   32 PPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDID-EQGREFKTIVNNGIKIGASLSVAEFIWYLRWL-CPLNEELYKTHNERRDRLTMKIIEEHAKSLK--ESGAKQHFVDALFTLKQQYDL 287          
The following BLAST results are available for this feature:
BLAST of FC877781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71BB_ARATH3.128e-3334.77Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH3.128e-3335.37Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN9.101e-3334.36Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71BL_ARATH1.552e-3235.18Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH1.552e-3235.63Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN2.648e-3232.83Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71DC_CATRO2.648e-3235.27Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71AF_ARATH1.314e-3132.80Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH1.716e-3133.07Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI2.928e-3131.15Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA24CC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877781 ID=FC877781; Name=FC877781; organism=Citrus clementina; type=EST; length=902bp
CTCCGATACACTAAAGCTAGTTTTACAACTATGGAGCTCATTCATCCCTC
TTGGGCTTCCTACTTGGTCGCTTGGCTAGCAACCCTTGCCCTAGTCCTCC
TCTCCCTCCGTCTCAGGCGCCGGAAACTCAACTTGCCGCCAGGCCCGAAA
CCCTGGCCAATCATTGGAAACCTCCACCTCATCGGCTCACTTCCCCATCG
CTCCCTCCATGCGTTGTCCGAAAAATATGGGCCCATTATGCAGCTTAAAT
TCGGGTCATTCCCCGTTGTCGTGGGCTCTTCCGCTGAGATGGCTAAGGTT
ATCCTCAAAACCCAAGATGCACTGTTTTCTGGCCGCCCCAAAACAGCAGC
CGGCAAGTACACAACCTTCAATTACTCAGATATTACTTGGTCACCTTATG
GACCATACTGGCGTCAGGCTCGTAAAATTTGTTCAATGGAATTGTTTAGT
GTTAAACGCCTCGAATCATTTGAGTACATAAGAGTACAAGAATTGAACTT
ATTTCTCAATCGCTTGTATGAATCATTCGGCAAGCCAACTATATTGAAAG
ATCATCTTTCGGATTTGAGTCTTGCTATTATAAGCCGTATGGTTTTGGGG
AAGAAATACACAGACAAGCAGCTCGAAAATGAGGTTGTGACACCGCAAGA
GTTCACGGCAATGGTTGATGAATTGTTCATGCTTAATGGGGTTTTAGATG
TCGGCGATTCGATTCCTTGGCTAGGGTTTTTGGATTTGCAAGGTAATATA
AAGAAAATGAAGGCTTTGGCTAAGAGGTTTGACAAGTTTTTGGAGCATGT
GCTGGATGAACATGACGCTAGAAGAAAAGGTGTCGAATATTATGTGGCTA
AAGATATGGTGGATGTGCTTTTGCAGCTTGCTGATGATCTCACTCTTGAA
GT
back to top