FC877782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.331e-39 Identity = 85/141 (60.28%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 30 MSLIPSFFGN--RRSSVSDPFSLD-VWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 MSLIP+ + N RRS++ DPFSLD +WDPF F PS S+ S+ ET+A NAR+DWKETPEAHVFKADLPG+ L+ISGQR EKE+KNDTWHRVERSSG F R+FRLPEN K+DQ+KA ME+G Sbjct: 1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF--FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENG 139
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.395e-38 Identity = 86/157 (54.78%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALS--SQFP----PETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RRS+V DPFSLD+WDPF FPF SG SS+ S FP ET+A AR+DWKETPEAHVFKAD+PGL LQISG+R E+E+K D WHRVERSSG F RRFRLP+N K +QIKASME+G +I+ISG Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.279e-37 Identity = 81/134 (60.45%), Postives = 93/134 (69.40%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGY--SSALSSQFP----PETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 RRS+V DPFSLD+WDPF FPF SG S ++ FP ET+A AR+DWKETPEAHVFKAD+PGL LQISG+R E+E+K D WHRVERSSG F RRFRLPEN K +QIKASME+G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENG 138
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 82/151 (54.30%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RRS+V DPFSLD+WDPF S + S + + +T+A NAR+DWKETPE+HVFKADLPG+ L ISGQR EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA ME+G AIEISG Sbjct: 5 RRSNVFDPFSLDLWDPF-----DSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.721e-37 Identity = 81/151 (53.64%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RRS+V DPFSLD+WDPF S + S + + +T+A NAR+DWKETPE+HVFKADLPG+ L ISGQR EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA +E+G AIEISG Sbjct: 5 RRSNVFDPFSLDLWDPF-----DSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 6.347e-37 Identity = 81/151 (53.64%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RRS+V DPFSLD+WDPF FPF SG S +L + + +A AR+DWKETPEAHVFKAD+PGL LQISG+R E+E+K D WHRVERSSG F RRFRLPEN K +QIKASME+G +I+I+G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSG-SGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.150e-36 Identity = 80/155 (51.61%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPP----ETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RR + DPFSLD+WDP FPF SG SS+ S P + +A AR+DWKETPE HVFKAD+PGL LQISG+R E+E+K+D WHRVERSSG F RRFRLPEN K +QIKASME+G +I+ISG Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.549e-35 Identity = 81/151 (53.64%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RRS+V DPF+ D WDPF + S + + +T+A NARVDWKETPE+HVFKADLPG+ L ISGQR EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KASME+G AIEISG Sbjct: 5 RRSNVFDPFA-DFWDPFDGV-----FRSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 80/156 (51.28%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVW-DPFRDF----PFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RRS+V DPF+ D+W DPF F P SG SS ET+A NARVDWKETPEAHVFK DLPG+ L +SG+R EKEDKND WHRVERSSG F RRFRLPE+ K++++KA +E+G AIEISG Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS--------ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.282e-29 Identity = 76/156 (48.72%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVW-DPFRDF----PFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 RR++V DPF+ D+W DPF F P SG S ET+A NAR+DWKETPEAHVFKADLPG+ L +SG+R EKEDKND WHRVERSSG F RRFRL E+ K++++KA +E+G AI+ISG Sbjct: 5 RRTNVFDPFA-DLWADPFDTFRSIVPAISGGGS--------ETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151 The following BLAST results are available for this feature:
BLAST of FC877782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877782 ID=FC877782; Name=FC877782; organism=Citrus clementina; type=EST; length=675bpback to top |