FC877791

Overview
NameFC877791
Unique NameFC877791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22
Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  309 VGILGIAWAFGGMIFILVYCTAG-ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYY-NRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            VG+  +A A   ++ +++  +AG ISGGH+NPAVT GL LG  +S+ RA LY + Q L +   C     F  SY     G   + LA G +   G+  EII TF L++TV++   DPK+ + D   P+L     GF V    LA    +G  +NPARSFG A++      W D W++WVG
Sbjct:   51 VGLFAVAVAHAFVVAVMI--SAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAAC-----FLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVG 216          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 60/174 (34.48%), Postives = 92/174 (52.87%), Query Frame = 3
Query:  324 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG--GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            IA+ FG  +  +      +SG HINPAVT G  +  ++S+++A  Y++ QC+GAI G   +K    +     GG  G +      N    +  E + TF+LV+ V + +DP R      +   APL +G A+   HL  I ++G  +NPARSFG AV+   +  W   W++WVG
Sbjct:   52 IAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKV---ALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV---QGVWTYHWVYWVG 215          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 64/184 (34.78%), Postives = 99/184 (53.80%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +  ++     + Y++AQ  GAI      +V A  K+ +   G  AN   +    GY+    L  E++ T   +  +  +T        S VPV  AP+ IG  + ++HL +IP+T T +NPARS G A ++  + A    W+FWV
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAISQLWLFWV 208          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.915e-22
Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYN--------RYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G +G++ AFG  +  ++Y    ISGGH NPAVT GL+ G +   +  + Y+++Q +G I     +                    G       G++  + + AEI+ T + +  +  ATD +        P  APL IG A+ +++L +IPIT T +NPARS   A+  N   A +  W FWV
Sbjct:   33 GIGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQN-TWALEQLWFFWV 210          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.139e-21
Identity = 74/217 (34.10%), Postives = 105/217 (48.39%), Query Frame = 3
Query:  192 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            RA I+EF+A            +         L  D     G++ ++ A    + + V     ISGGH+NPA+TFG  LG ++SLIRAL Y +AQ LGA+     ++        R  G A  LA G      +  E   TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++  +   W   W++W+G
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGK-----LYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGM--RPPGFA--LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLG 227          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.488e-21
Identity = 67/192 (34.90%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAIC-----------GCGF--VKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQ--WIFWV 836
            G+G  G+A AFG  +  + Y    ISG H+NPAV+ GL+ G +    +   Y+VAQ LGAI            G GF   K F  + Y  +  G      GY+    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IP+T T +NPARS G A+       W  Q  W+FW+
Sbjct:   32 GIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWL 208          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.943e-21
Identity = 67/184 (36.41%), Postives = 96/184 (52.17%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G LG+A+AFG  +  + Y   GISGGH NPAV+ GL +  K      + Y+VAQ LGA+      +V    K+     G  AN   +    GY+  + L  EII T   +  +  +T          VPV  AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FW+
Sbjct:   33 GIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGST-------HGRVPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWL 208          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.538e-21
Identity = 66/183 (36.07%), Postives = 96/183 (52.46%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGHSLELSL 860
            +L +A A    +F  V  +  +SGGH+NPAV+FG  +G ++S+IRA+ Y +AQ LG+I     ++       N        ++ G   G     E++ TF L+YTV+ +A DPKR A    V  +APL IG  V    L   P  G  +NPA +FG +++      W   WIFWVG  L  +L
Sbjct:   58 LLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVT----NNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAAL 229          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.329e-21
Identity = 63/175 (36.00%), Postives = 89/175 (50.86%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            ++ IA  FG  +   ++C AG+SGG +NPAV+  L L R VS  R ++  V+Q +  +   G   A            AN L  G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARS GAAV       +   WI+W+G
Sbjct:   91 LIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVL----FANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIG 254          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.329e-21
Identity = 63/184 (34.24%), Postives = 100/184 (54.35%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGAN-----ELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G LG+A AFG  +  + Y    ISG H+NPAV+ GL++G +    + L Y+VAQ LG +   G  ++ A  K+ ++   G A+         GY+    L +E++ T + +  +  AT  KR+ +       AP+ IG  + ++HL +IP+T T +NPARS  A  +Y  + A    W+FWV
Sbjct:   32 GIGYLGVALAFGLSVLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATS-KRAPQG-----FAPIAIGLTLTLIHLISIPVTNTSVNPARS-TAVALYVGDWAVSQLWLFWV 208          
The following BLAST results are available for this feature:
BLAST of FC877791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
TIP41_ARATH1.757e-2238.89Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
AQP_DROME2.295e-2234.48Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQPZ1_RHIME2.295e-2234.78Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQPZ_PHOLL3.915e-2231.35Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
TIP31_ORYSJ1.139e-2134.10Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQPZ_CHRVO1.488e-2134.90Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPZ1_AGRT51.943e-2136.41Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIPA_PHAVU2.538e-2136.07Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
AQY1_YEAST4.329e-2136.00Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ_PSEAE4.329e-2134.24Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877791 ID=FC877791; Name=FC877791; organism=Citrus clementina; type=EST; length=862bp
CACACAGTCGTAGCTCTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAA
AATAAAAGGGAAAAAATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGG
CGGCGGCGGCGAGTTCTCAGCCAAGGACTACCACGACCCCCCTCCGGCGC
CGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTA
ATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTTATGTTACCGTCTTGAC
TGTGATTGGATACAAGAGCCAGACTGATCCCAACTTGAATACCGATCAGT
GTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATC
TTCATTCTCGTTTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCC
GGCTGTGACATTCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAG
CTCTTTTGTACATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGG
TTTGTGAAGGCTTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGC
CAATGAGCTAGCTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGA
TCATCGGTACTTTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCT
AAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCTTGGCACCACTCCCCAT
TGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACCGGAA
CCGGCATCAACCCAGCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAG
GAGAAAGCCTGGGATGACCAATGGATCTTCTGGGTTGGACATTCATTGGA
GCTTTCGTTGCT
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