FC877791

Overview
NameFC877791
Unique NameFC877791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 3
Query:  327 AWAFGGMIFILVYCTAG--ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            A A G  + + V  TAG  ISGGH+NPAVT  L +G  V+L R+ LY+ AQ L +   C  ++          GG A   + LA+G     G+ AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NPARSFG AV       W   W++WVG
Sbjct:   57 AVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLT-------GGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAV---ASGVWTHHWVYWVG 218          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18
Identity = 60/175 (34.29%), Postives = 87/175 (49.71%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            +L IA  F  +  + V  T   SG H NPAVT    +G  +SL RA+ Y+ AQ +GA  G   +         R   G N + +  + G  +  E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARSFG A+I  K   +   W+FWVG
Sbjct:   55 VLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDI-RETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVG 219          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17
Identity = 63/179 (35.20%), Postives = 91/179 (50.84%), Query Frame = 3
Query:  312 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTV-FSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            G+L  A A G  + +++     ISGGH NPAV+    L   ++L+  L Y V+Q LG + G    KA   ++ ++N  G     + +       L AEII T +L   V   A + K          LAP  IGFAV +  LA  P++G  +NPAR+FG AV+ N    W+  WI+W+G
Sbjct:   64 GLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKG------PLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH---WNFHWIYWLG 233          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17
Identity = 57/166 (34.34%), Postives = 84/166 (50.60%), Query Frame = 3
Query:  357 LVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVY-----TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            +++  +GISG  +NPAVT G     ++ ++  + +++ QC+GA+ G G +KA   ++Y R    A  LA G N   G   E++ T  LV+      V++  DPK S        +APL IG AV          TG  +NPARSFG AV       W   +I+W G
Sbjct:   80 IIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVF---SDTWHRHYIYWFG 234          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17
Identity = 70/235 (29.79%), Postives = 103/235 (43.83%), Query Frame = 3
Query:  153 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYT--VFSATDPKR----SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            L+D +        R+ +AEFI+            I  +  T P++ T   G +    +A AFG  +F  V   A +SGGH+NPAVTF   +G ++ +  A+ Y  +Q LGA   C  +  F              +A       G   E + TF+LVYT  V    +P+       R+     L  L +G       LA   +TG  +NPARSFG AV+    K   +Q ++W G
Sbjct:    7 LVDLKRCFSAPSLRSYLAEFISTFLFVFTAVGSAISARMLTTPDV-TSSAGPLVATAVAQAFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAG----EEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFK---NQAVYWAG 231          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 59/170 (34.71%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  360 VYCTAG--ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGHSLELSL 860
            V  TAG  +SGGH+NPAVT G+ +   ++ +RALLY+ AQ L +   C  ++              + L  G     GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARSFG A+       W + W++W+G  L  SL
Sbjct:   77 VLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVT----PVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG---VWTNHWVYWIGPLLGGSL 234          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 65/228 (28.51%), Postives = 100/228 (43.86%), Query Frame = 3
Query:  159 DFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            + +E+      RAV+AE +             +   S   P    D      +  +A A      +LV     +SGGH+NPAVT GL +   ++ +RA+LY+ AQ L +   C  ++              + L  G +   GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARSFG A+       W + W++W+G
Sbjct:   13 EHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPG---DAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVT----PVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIG 225          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 58/175 (33.14%), Postives = 79/175 (45.14%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            +L  A A G  +  L  C   ISG HINPAVT  L + R +S IRA +Y+ AQC G I G   +       Y      A   +         G E I TF++V   F +TDP +    +     +   IG A       ++P     +NPARS G + + NK   WD  W++W G
Sbjct:   99 LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFG 261          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 70/226 (30.97%), Postives = 101/226 (44.69%), Query Frame = 3
Query:  192 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIG---TFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            RA  AEF +            I  +  T     T     +    +A AFG  +F  V+  A +SGGH+NPAVTF   +G  +++  A+ Y  +Q LG+   C    ++ A Q     R    A E+       TG GA I+    TF++VYTV  A DP+       +      L  L +G       LA   +TG  +NPARSFG AV+      + +Q ++W G
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDE--TSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRI---AVEM-------TGFGAGILEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH---YSNQAVYWAG 226          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.476e-16
Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 3
Query:  312 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            G+L  A A G  + +++     ISGGH NPAV+  + L   +  +  + Y V+Q  G + G    K    ++ ++N  G     + +       LG EI+ T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD  WI+W+G
Sbjct:   66 GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAG---YWDFHWIYWLG 235          
The following BLAST results are available for this feature:
BLAST of FC877791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
TIP43_MAIZE2.626e-1835.59Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
AQP6_HUMAN4.479e-1834.29Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP8_HUMAN1.702e-1735.20Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
AQPB_DICDI4.953e-1734.34Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
TIP51_MAIZE8.448e-1729.79Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
TIP42_MAIZE3.210e-1634.71Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP41_MAIZE3.210e-1628.51Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
BIB_DROME3.210e-1633.14Neurogenic protein big brain OS=Drosophila melanog... [more]
TIP51_ORYSJ4.193e-1630.97Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQP8_RAT5.476e-1631.46Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877791 ID=FC877791; Name=FC877791; organism=Citrus clementina; type=EST; length=862bp
CACACAGTCGTAGCTCTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAA
AATAAAAGGGAAAAAATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGG
CGGCGGCGGCGAGTTCTCAGCCAAGGACTACCACGACCCCCCTCCGGCGC
CGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTA
ATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTTATGTTACCGTCTTGAC
TGTGATTGGATACAAGAGCCAGACTGATCCCAACTTGAATACCGATCAGT
GTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATC
TTCATTCTCGTTTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCC
GGCTGTGACATTCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAG
CTCTTTTGTACATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGG
TTTGTGAAGGCTTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGC
CAATGAGCTAGCTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGA
TCATCGGTACTTTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCT
AAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCTTGGCACCACTCCCCAT
TGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACCGGAA
CCGGCATCAACCCAGCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAG
GAGAAAGCCTGGGATGACCAATGGATCTTCTGGGTTGGACATTCATTGGA
GCTTTCGTTGCT
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