FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCV (Chaperone protein dnaK OS=Chlamydophila caviae GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 112/224 (50.00%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMV 730
            T+TRA FE+L   L  +   P +K L D+K+  S + DV+LVGG +R+P VQ++++  F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L ++EI+RM+
Sbjct:  297 TLTRAHFEKLASTLLERTKAPCQKALADAKLSASDIDDVLLVGGMSRMPAVQEVVKSIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEDEIQRMI 514          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLAB (Chaperone protein dnaK OS=Chlamydophila abortus GN=dnaK PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMV 730
            T+TRA FE+L  +L  +   P +K L D+K+  S + DV+LVGG +R+P VQ++++  F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L ++EI+RM+
Sbjct:  297 TLTRAHFEKLASNLIERTKAPCQKALADAKLAASDIDDVLLVGGMSRMPAVQEVVKSIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEDEIQRMI 514          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURPS (Chaperone protein dnaK OS=Burkholderia pseudomallei GN=dnaK PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURP6 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 668) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURP1 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 1710b) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURP0 (Chaperone protein dnaK OS=Burkholderia pseudomallei (strain 1106a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURMS (Chaperone protein dnaK OS=Burkholderia mallei (strain SAVP1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURMA (Chaperone protein dnaK OS=Burkholderia mallei GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURM9 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10229) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURM7 (Chaperone protein dnaK OS=Burkholderia mallei (strain NCTC 10247) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 VTRAKLEALVEDLVERTIEPCRTAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVK 518          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLCV1.620e-5250.00Chaperone protein dnaK OS=Chlamydophila caviae GN=... [more]
DNAK_CHLAB1.620e-5250.00Chaperone protein dnaK OS=Chlamydophila abortus GN... [more]
DNAK_BURPS1.620e-5249.55Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP61.620e-5249.55Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP11.620e-5249.55Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURP01.620e-5249.55Chaperone protein dnaK OS=Burkholderia pseudomalle... [more]
DNAK_BURMS1.620e-5249.55Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURMA1.620e-5249.55Chaperone protein dnaK OS=Burkholderia mallei GN=d... [more]
DNAK_BURM91.620e-5249.55Chaperone protein dnaK OS=Burkholderia mallei (str... [more]
DNAK_BURM71.620e-5249.55Chaperone protein dnaK OS=Burkholderia mallei (str... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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