FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BACSK (Chaperone protein dnaK OS=Bacillus clausii (strain KSM-K16) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 115/260 (44.23%), Postives = 152/260 (58.46%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            T+TRA+F+EL+ DL  + + P  + L D+ +  S +  VVLVGGSTRIP VQ+ ++    GK+  K +NPDE           +L+G+    V+D           GIET GGV T LI RNTTIPT K Q+FST +DNQP V I V +GER    DN  LG+F+LT IPPAPRGVPQI V FDIDANGI++V A+D     +  ITIT+  G LS+EEI++MVQ                   N  +   ++   T++D
Sbjct:  268 TLTRAKFDELSADLVERTLGPTRRALSDAGLSASDIDKVVLVGGSTRIPAVQEAIKKL-TGKDPHKGVNPDEVVALGAAVQAGVLTGD----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPSVDIHVLQGEREMAADNKTLGRFQLTDIPPAPRGVPQIEVTFDIDANGIVNVKAKDLGTNKEQSITITSSSG-LSEEEIDKMVQEAEANAEADKKRREQVELRNEADQLVFSTEKTLKD 521          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_AZOSB (Chaperone protein dnaK OS=Azoarcus sp. (strain BH72) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 114/224 (50.89%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+FE L  DL  + +EP    L+D+ +  S + DV+LVGG TR+PKV + +++FF GKE  + +NPDE           +L GE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER     N  LG+F L+ IPPAPRG+PQI V FDIDANGILHVSA+DK  G +N+I I  + G LS EE+ERMV+
Sbjct:  300 ITRAKFESLVEDLIERSIEPCRIALKDAGVKVSDIDDVILVGGQTRMPKVIEKVKEFF-GKEPRRDVNPDEAVAVGASIQGGVLQGE----VKDVLLLDVTPLSLGIETLGGVMTKLIQKNTTIPTKASQVFSTADDNQSAVTIHVLQGEREMASGNKSLGQFNLSDIPPAPRGMPQIEVTFDIDANGILHVSAKDKATGKENKIKIQANSG-LSDEEVERMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.620e-52
Identity = 113/225 (50.22%), Postives = 145/225 (64.44%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T++RA+FEE+  DL  +C  PVE  +RD+KIDKS + ++VLVGGSTRIP VQ++++    GK+  + +NPDE           +LSGE    V+D           G+ET GGVMT +IPRNTTIPTKK + FST  D Q  V I V +GER    DN  LG F L GIPPAPRGVPQI V FDIDANGIL+V+A+D+  G +  I+IT     L   E++RMV+
Sbjct:  294 TLSRAKFEEICSDLIDRCGIPVENAIRDAKIDKSALDEIVLVGGSTRIPAVQEVVKKIL-GKDPNQGVNPDEVVAVGAAIQGGVLSGE----VKDILLLDVSPLSLGVETLGGVMTKIIPRNTTIPTKKSETFSTAVDGQSNVEIHVLQGEREMANDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILNVTAKDRGTGKEQSISITG-ASTLPDTEVDRMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP2 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain HaA2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+FE L  DL +K +EP  K L+D+ +   ++ +VVLVGG TR+PKVQ++++  F GKE  K +NPDE           +L G+    V+D           GIET GGV T +I RNTTIPTKK Q+FST  DNQ  V I+V++GER    DN +LG+F+L GIPPAPRG+PQI V FDIDANGI++VSA+DK  G + QI I    G LS  +I++MV+
Sbjct:  295 LTRAKFEALVDDLVQKTIEPCRKALKDAGLTAGEIGEVVLVGGMTRMPKVQEVVKQLF-GKEPHKGVNPDEVVAIGAAIQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRIIERNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKILGQFDLMGIPPAPRGMPQIEVTFDIDANGIVNVSAKDKATGKEQQIRI-QASGGLSDSDIDKMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_RENSM (Chaperone protein dnaK OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 115/253 (45.45%), Postives = 147/253 (58.10%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNM 820
            +TRA+F+EL  DL  +  +P    + ++ I  S +  +VLVGGSTR+P V +L++    GK+  K +NPDE           +L GE     +D           GIET GGVMT LI RNT IPTK+ + F+T  DNQP V IQV++GER  T+DN  LG FELTGI PA RGVPQ+ V FDIDANGI+HVSA+DK  G +  +TIT     LSKE+IERMV                    NS E  AY++
Sbjct:  276 LTRAKFQELTSDLLERTKKPFNDVIAEAGIKVSDIDHIVLVGGSTRMPAVTELVKQLAGGKDPNKGVNPDEVVAVGAALQAGVLKGER----KDVLLIDVTPLSLGIETKGGVMTKLIERNTAIPTKRSETFTTADDNQPSVAIQVFQGEREFTRDNKPLGTFELTGIAPAQRGVPQVEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSS-LSKEDIERMVADAEAHAAEDKTRREQADVRNSAEQLAYSV 523          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_PSEF5 (Chaperone protein dnaK OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 113/224 (50.45%), Postives = 142/224 (63.39%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            I+RA+ E L  DL ++ +EP    L+D+ ID   ++DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +L+G+    V+D           GIET GGVMT LI +NTTIPTKK Q+FST  DNQ  V I V +GER +   N  LGKF+L  IPPAPRGVPQI V FDIDANGILHV A+DK  G    I I  + G LS EEI++M++
Sbjct:  300 ISRAKLESLVEDLVQRTIEPCRIALKDAGIDVGSINDVILVGGQTRMPLVQKTVTDFF-GKEARKDVNPDEAVAMGAAIQGAVLAGD----VKDVLLLDVSPLTLGIETMGGVMTALIEKNTTIPTKKSQVFSTADDNQGAVTIHVLQGERKQAAQNKSLGKFDLADIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKTQSIVIKANSG-LSDEEIQQMIR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_PROAC (Chaperone protein dnaK OS=Propionibacterium acnes GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 105/224 (46.88%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA F+ +  DL  +C  P    ++D+ ++ SQ+ +V+LVGGSTR+P V +L+++   GK+  K +NPDE           +L GE    V+D           GIET GGVMT +I RNTTIPTK+ ++F+T  DNQP V+IQV++GER   +DN  LG FELTG+ PAPRG+PQI V FDIDANGI+HV A+D   G +  +T+T     L K+EI+RMV+
Sbjct:  272 LTRAEFQRMTSDLLERCRTPFNAVMKDAGLNVSQIDEVILVGGSTRMPAVAELVKELA-GKDPHKGVNPDEVVALGASLQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKIIERNTTIPTKRSEVFTTAEDNQPSVMIQVFQGEREFVRDNKSLGNFELTGLMPAPRGIPQIEVSFDIDANGIVHVHAKDMATGKEQSMTVTGGSA-LGKDEIDRMVK 489          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_JANMA (Chaperone protein dnaK OS=Janthinobacterium sp. (strain Marseille) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 110/224 (49.11%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  +L  K +EP    ++D+ +  S + D++LVGG TR+PKVQ+ ++DFF GK+  K +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q+FST  DNQP V I+V++GER     N  LG+F L GIPP+ RG PQI V FDIDANGILHV A+DK  G +N+ITI  + G L++EEI++MVQ
Sbjct:  301 ITRAKLESLVEELISKTIEPCRTAIKDAGVKVSDIDDIILVGGMTRMPKVQETVKDFF-GKDPRKDVNPDEAVAVGAAIQGSVLSGDR----KDLLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTKFSQVFSTADDNQPAVTIKVFQGEREMAVGNKALGEFNLEGIPPSARGTPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LTEEEIQKMVQ 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_HELHP (Chaperone protein dnaK OS=Helicobacter hepaticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 115/261 (44.06%), Postives = 156/261 (59.77%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRDEK 844
            ITRA+FE L  DL    ++ +E  ++D+ + +S + +VV+VGGSTRIPKVQ+ ++ F + K+L KS+NPDE           +L G+    V+D           GIETAGG+ T ++ R  TIPTKK QIFSTY DNQP V I V +GER   +DN  LG+F+L+GIP APRGVPQI V FDIDANGIL VSA+DK  G   +I I+   G LS  EIE+MV+                   N+ ++  Y  + ++ + K
Sbjct:  294 ITRAKFESLIDDLIEDTIKKIEFVIKDAGLSQSDISEVVMVGGSTRIPKVQERVKAFIS-KDLNKSVNPDEVVAVGAAIQGGVLKGD----VKDVLLLDVTPLSLGIETAGGISTKVVERGVTIPTKKTQIFSTYEDNQPAVSINVLQGERELARDNKSLGRFDLSGIPAAPRGVPQIEVTFDIDANGILTVSAKDKATGKSQEIKISGSSG-LSDAEIEKMVKEAELHKEEDTKKKAIIELRNNADSLVYQTKKSLEEFK 548          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_GRAFK (Chaperone protein dnaK OS=Gramella forsetii (strain KT0803) GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 112/223 (50.22%), Postives = 143/223 (64.13%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERM 727
            TI+R++FE+L  +L  + MEPV+K L D+ + KS + +V+LVGGSTRIPK+Q+ ++ FF GK+  K +NPDE           +L+G+    V+D           GIET GGV T LI  NTTIPTKK Q FST +DNQP V I V +GER    DN  +G+F L GIPP+PRG PQI V FDIDANGI+ VSA DK  G    I I    G L++EEIE+M
Sbjct:  293 TISRSKFEQLAAELVTRSMEPVKKALSDAGLSKSDIDEVILVGGSTRIPKIQEEVEAFF-GKKPSKGVNPDEVVAIGAAIQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVNTKLIESNTTIPTKKSQTFSTAADNQPSVEIHVLQGERPMATDNKTIGRFHLDGIPPSPRGTPQIEVTFDIDANGIIKVSATDKATGKSQDIRIEASSG-LTEEEIEKM 509          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BACSK1.620e-5244.23Chaperone protein dnaK OS=Bacillus clausii (strain... [more]
DNAK_AZOSB1.620e-5250.89Chaperone protein dnaK OS=Azoarcus sp. (strain BH7... [more]
DNAK2_SYNY31.620e-5250.22Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_RHOP22.116e-5249.55Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RENSM2.116e-5245.45Chaperone protein dnaK OS=Renibacterium salmoninar... [more]
DNAK_PSEF52.116e-5250.45Chaperone protein dnaK OS=Pseudomonas fluorescens ... [more]
DNAK_PROAC2.116e-5246.88Chaperone protein dnaK OS=Propionibacterium acnes ... [more]
DNAK_JANMA2.116e-5249.11Chaperone protein dnaK OS=Janthinobacterium sp. (s... [more]
DNAK_HELHP2.116e-5244.06Chaperone protein dnaK OS=Helicobacter hepaticus G... [more]
DNAK_GRAFK2.116e-5250.22Chaperone protein dnaK OS=Gramella forsetii (strai... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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