FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_COREF (Chaperone protein dnaK OS=Corynebacterium efficiens GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 117/271 (43.17%), Postives = 155/271 (57.20%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD------EKIAGK 856
            ++RA F+ +  DL  +   P  + ++D+ I  S++  VVLVGGSTR+P V  L+++   G+E  K +NPDE           +L GE    V+D           GIET GGVMT LI RNTTIPTK+ + F+T  DNQP V IQV++GER     N LLG FEL GI PAPRGVPQI V FDIDANGI+HV+A+DK  G +N ITI +  G LS+EEI+RM++                   N+ E+  Y     V +      E++ GK
Sbjct:  273 LSRAEFQRITQDLLDRTKTPFNQVIKDAGISVSEIDHVVLVGGSTRMPAVTDLVKELTGGREPNKGVNPDEVVAVGAALQAGVLRGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTAEDNQPSVQIQVFQGEREIASANKLLGSFELGGIAPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTITIQDGSG-LSQEEIDRMIKDAEAHAEEDKKRREEQEIRNNAESLVYQTHKFVEENDGKISEELKGK 538          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLMU (Chaperone protein dnaK OS=Chlamydia muridarum GN=dnaK PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 111/225 (49.33%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE L   L  +  +P  + L+D+K+  S + DV+LVGG +R+P VQ ++++ F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L +EEI++M++
Sbjct:  297 TLTRAQFEHLASSLIERTKQPCAQALKDAKLSASDIDDVLLVGGMSRMPAVQAVVKEIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEEEIQQMIR 515          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BLOFL (Chaperone protein dnaK OS=Blochmannia floridanus GN=dnaK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 112/224 (50.00%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + ++P++  L+D+ +  S V+DV+LVGG TR+P VQ+ + +FFN KE  K +NPDE           +LSG+    V+D           GIET GGVMT+LI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PA RG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L++EEI++MVQ
Sbjct:  301 VTRAKLESLVEDLVNRTLDPLKTALKDANLSVSSVNDVILVGGQTRMPLVQKKVSEFFN-KEPRKDVNPDEAVAIGAAVQGGVLSGD----VKDVLLLDVTPLSLGIETMGGVMTSLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGIAPAMRGIPQIEVTFDIDADGILHVSAKDKNSGREQKITIKASSG-LNEEEIKKMVQ 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK2_STRAW (Chaperone protein dnaK2 OS=Streptomyces avermitilis GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 109/260 (41.92%), Postives = 152/260 (58.46%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            T+ R+ FE++  DL  +C+ PV++ + D+K+ +S + +V+LVGGSTRIP VQ L++    GK+   S+NPDE           +L GE    V+D           G+ET GGVMT +I RNTTIP ++ + FST  DNQP V + V +GER R  DN +LG+F+LT I PAPRG PQ+ V FDIDANGIL+V+A DK  G +  ITI ++   L + E+ERMVQ                   N L+  AY +   + +
Sbjct:  292 TVMRSTFEQITSDLVERCLGPVQQAMADAKVGESDIDEVILVGGSTRIPAVQALVRRLTGGKDPNMSVNPDEVVALGAAIQAGVLKGE----VKDVLLLDVTPLSLGVETRGGVMTKIIERNTTIPVRRSETFSTAEDNQPAVDVVVLQGERERAADNRVLGRFQLTDIRPAPRGEPQVEVTFDIDANGILNVTARDKDTGKEQGITI-SESSNLDRSEVERMVQEAERNQGQDQALREAVDARNELDAVAYQVEKRLAE 546          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.763e-52
Identity = 109/224 (48.66%), Postives = 149/224 (66.52%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+FEEL   L ++   PVE+ L+D+ +  +Q+ +V+LVGG+TR+P VQQ++++   GKE  +S+NPDE           +L GE    V+D           G+ET GGVMT LIPRNTTIPT+K +IF+T   NQ  V I V +GER   +DN  LG+F L GIPP P GVPQI VCFDIDANGILHV+A++++ G +  ITI N    LS+EEI+R+++
Sbjct:  294 LTRAKFEELIQPLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELL-GKEPNRSVNPDEVVAMGAAIQAGVLMGE----VRDVVLLDVTPLSLGVETKGGVMTVLIPRNTTIPTRKCEIFTTAEHNQTAVEIHVLQGERPMAQDNKSLGRFRLEGIPPMPAGVPQIEVCFDIDANGILHVTAKERSTGREASITIQNTT-TLSEEEIQRIIE 511          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.763e-52
Identity = 109/224 (48.66%), Postives = 149/224 (66.52%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+FEEL   L ++   PVE+ L+D+ +  +Q+ +V+LVGG+TR+P VQQ++++   GKE  +S+NPDE           +L GE    V+D           G+ET GGVMT LIPRNTTIPT+K +IF+T   NQ  V I V +GER   +DN  LG+F L GIPP P GVPQI VCFDIDANGILHV+A++++ G +  ITI N    LS+EEI+R+++
Sbjct:  294 LTRAKFEELIQPLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELL-GKEPNRSVNPDEVVAMGAAIQAGVLMGE----VRDVVLLDVTPLSLGVETKGGVMTVLIPRNTTIPTRKCEIFTTAEHNQTAVEIHVLQGERPMAQDNKSLGRFRLEGIPPMPAGVPQIEVCFDIDANGILHVTAKERSTGREASITIQNTT-TLSEEEIQRIIE 511          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.763e-52
Identity = 114/223 (51.12%), Postives = 143/223 (64.13%), Query Frame = 2
Query:   65 TRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            TRA FE+L  DL  K +EP    L+D+ +  S + +VVLVGG TR+PKVQ+ ++ FF G+E  K +NPDE           +L    N++V D           GIET GGV T LI RNTTIPTKK Q+FST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDID NGI+HVSA+DK +G + ++TI    G LS  EIE+MV+
Sbjct:  295 TRAEFEKLVDDLIEKTVEPCITALKDAGLKASDIQEVVLVGGMTRMPKVQEAVKKFF-GREPHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTADDNQHAVTIRVFQGEREMAASNKLLGQFNLEGIPPAPRGVPQIEVTFDIDVNGIVHVSAKDKASGKEQKVTI-QASGGLSDAEIEQMVK 511          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_MYCCT (Chaperone protein dnaK OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=dnaK PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.763e-52
Identity = 118/255 (46.27%), Postives = 152/255 (59.61%), Query Frame = 2
Query:   44 IDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENY 808
            I F  T+TR+ F ++   L    ++PV+  L  +K   S++++V+LVGGSTRIP VQ+L++   N KE  +SINPDE           +L+GE    V D           GIET GGVMT LI RNTTIP K+ QIFST +DNQP V I V +GERA   DN  LG+F+LTGI PAPRG+PQI V F+IDANGI+ VSA+DK    +  ITI+N  G LS+ E+ERM++                   N  ENY
Sbjct:  266 ISFATTLTRSEFNKITKHLVDLTIQPVKDALSAAKKTPSEINEVLLVGGSTRIPAVQELVKSLLN-KEPNRSINPDEVVAMGAAVQGGVLAGE----VTDILLLDVTPLSLGIETMGGVMTKLIERNTTIPAKRTQIFSTATDNQPAVDINVLQGERAMAADNKSLGQFQLTGIQPAPRGIPQIEVTFEIDANGIVSVSAKDKNTNEEKTITISN-SGNLSEAEVERMIKEAQENAANDEAKKKNIELKNKAENY 514          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_MANSM (Chaperone protein dnaK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=dnaK PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.763e-52
Identity = 116/224 (51.79%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + MEPV+  L D+ +  SQ+ DV+LVGG TR+P VQQ + +FF GKE  K +NPDE           +L+G     V D           GIET GGVMTTLI +NTTIPTKK Q+FST  DNQ  V I V +GER +   N  LG+F L GI PAPRG+PQI V FDIDA+GI+HVSA+DK  G + QITI    G LS EEI++MV+
Sbjct:  300 LTRAKLEALVEDLVARSMEPVKVALSDAGLSVSQIDDVILVGGQTRMPLVQQKVAEFF-GKEPRKDVNPDEAVAVGAAVQGGVLAGN----VTDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDADGIIHVSAKDKGTGKEQQITIKASSG-LSDEEIQQMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_HAEDU (Chaperone protein dnaK OS=Haemophilus ducreyi GN=dnaK PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.763e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L D+ +  S+++DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +L+G+    V D           GIET GGVMT+LI +NTTIPTKK Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDANGI++VSA+DK  G + QI I    G LS EE+E+MV+
Sbjct:  299 VTRAKLEALVEDLVSRSLEPLKTALADAGLSVSEINDVILVGGQTRMPLVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLAGD----VTDVLLLDVTPLSLGIETMGGVMTSLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSG-LSDEEVEQMVR 516          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_COREF2.116e-5243.17Chaperone protein dnaK OS=Corynebacterium efficien... [more]
DNAK_CHLMU2.116e-5249.33Chaperone protein dnaK OS=Chlamydia muridarum GN=d... [more]
DNAK_BLOFL2.116e-5250.00Chaperone protein dnaK OS=Blochmannia floridanus G... [more]
DNAK2_STRAW2.116e-5241.92Chaperone protein dnaK2 OS=Streptomyces avermitili... [more]
DNAK_THET82.763e-5248.66Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_THET22.763e-5248.66Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_RICAH2.763e-5251.12Chaperone protein dnaK OS=Rickettsia akari (strain... [more]
DNAK_MYCCT2.763e-5246.27Chaperone protein dnaK OS=Mycoplasma capricolum su... [more]
DNAK_MANSM2.763e-5251.79Chaperone protein dnaK OS=Mannheimia succiniciprod... [more]
DNAK_HAEDU2.763e-5250.45Chaperone protein dnaK OS=Haemophilus ducreyi GN=d... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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