FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig403 contig Ccv1_Contig403:50..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BACHD (Chaperone protein dnaK OS=Bacillus halodurans GN=dnaK PE=2 SV=3)

HSP 1 Score: 205.297 bits (521), Expect = 3.609e-52
Identity = 116/260 (44.62%), Postives = 152/260 (58.46%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            T+TRA+FEEL+  L  + + P  + L+DS +  S++  VVLVGGSTRIP VQ+ +++   GKE  K +NPDE           +L+G+    V+D           GIET GGV T LI RNTTIPT K QIFST +DNQP V I V +GER    DN  LG+F+LT IPPAPRGVPQI V FDIDANGI++V A+D     +  ITIT+  G L+ EEI++MV+                   N  +   +    T++D
Sbjct:  268 TLTRAKFEELSSHLVERTLGPTRQALQDSGLSASEIDKVVLVGGSTRIPAVQEAIKNL-TGKEPHKGVNPDEVVALGAAVQAGVLTGD----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQIFSTAADNQPSVDIHVLQGEREMAADNKTLGRFQLTDIPPAPRGVPQIEVTFDIDANGIVNVKAKDLGTNKEQSITITSSSG-LTDEEIDQMVKDAEANAEADKKRREEVELRNEADQLVFTTEKTLKD 521          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPY (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPS (Chaperone protein dnaK OS=Yersinia pseudotuberculosis GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPP (Chaperone protein dnaK OS=Yersinia pestis (strain Pestoides F) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPN (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPG (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Angola) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPE (Chaperone protein dnaK OS=Yersinia pestis GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPB (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERPA (Chaperone protein dnaK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_YERE8 (Chaperone protein dnaK OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +LSGE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R +DN  LG+F L GI PAPRG+ QI V FDIDA+GILHVSA+DK  G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLSGE----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAQDNKSLGQFNLDGIQPAPRGMAQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSG-LNEEEIQKMVR 517          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BACHD3.609e-5244.62Chaperone protein dnaK OS=Bacillus halodurans GN=d... [more]
DNAK_YERPY4.714e-5250.45Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPS4.714e-5250.45Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPP4.714e-5250.45Chaperone protein dnaK OS=Yersinia pestis (strain ... [more]
DNAK_YERPN4.714e-5250.45Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERPG4.714e-5250.45Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERPE4.714e-5250.45Chaperone protein dnaK OS=Yersinia pestis GN=dnaK ... [more]
DNAK_YERPB4.714e-5250.45Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]
DNAK_YERPA4.714e-5250.45Chaperone protein dnaK OS=Yersinia pestis bv. Anti... [more]
DNAK_YERE84.714e-5250.45Chaperone protein dnaK OS=Yersinia enterocolitica ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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