FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig403 contig Ccv1_Contig403:50..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_RHIME (Chaperone protein dnaK OS=Rhizobium meliloti GN=dnaK PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ++RA+FE L  DL +K + P +  L+D+ +  +++ +VVLVGG TR+PKVQ+ ++  F GKE  K +NPDE           +L G+    V+D           GIET GGV T LI RNTTIPTKK Q+FST  DNQ  V I+V +GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+ VSA+DK  G ++QI I    G LS  EIE+MV+
Sbjct:  295 LSRAKFESLVEDLIQKTIAPCKAALKDAGVSAAEIDEVVLVGGMTRMPKVQETVKQLF-GKEPHKGVNPDEVVAMGAAIQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQSAVTIRVSQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVQVSAKDKGTGKEHQIRI-QASGGLSDAEIEKMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMF (Chaperone protein dnaK OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 116/224 (51.79%), Postives = 140/224 (62.50%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+FE L  DL  + +EP    L+D+ +  S + DV+LVGG +R+PKVQ+ ++DFF GKE  K +NPDE           +LSG  +    D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R   N  LG+F L  I PAPRG+PQI V FDIDANGILHVSA+DK  G    ITI    G LS+EEIERMV+
Sbjct:  301 ITRAKFESLVEDLIARSIEPCRTALKDAGLSTSDIDDVILVGGQSRMPKVQEAVRDFF-GKEPRKDVNPDEAVAVGAAIQGEVLSGGRS----DVLLLDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERASANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSG-LSEEEIERMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+GE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGE----VKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKDLGQFNLDGISPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 110/225 (48.89%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE L   L  +  +P  + L+D+K+  S + DV+LVGG +R+P VQ ++++ F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L ++EI++M++
Sbjct:  297 TLTRAQFEHLASSLIERTKQPCAQALKDAKLSASDIDDVLLVGGMSRMPAVQAVVKEIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEDEIQQMIR 515          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 110/225 (48.89%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE L   L  +  +P  + L+D+K+  S + DV+LVGG +R+P VQ ++++ F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L ++EI++M++
Sbjct:  297 TLTRAQFEHLASSLIERTKQPCAQALKDAKLSASDIDDVLLVGGMSRMPAVQAVVKEIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEDEIQQMIR 515          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 110/225 (48.89%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE L   L  +  +P  + L+D+K+  S + DV+LVGG +R+P VQ ++++ F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L ++EI++M++
Sbjct:  297 TLTRAQFEHLASSLIERTKQPCAQALKDAKLSASDIDDVLLVGGMSRMPAVQAVVKEIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEDEIQQMIR 515          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 110/225 (48.89%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE L   L  +  +P  + L+D+K+  S + DV+LVGG +R+P VQ ++++ F GKE  K +NPDE           +L GE    V+D           GIET GGVMT L+ RNTTIPT+K+QIFST +DNQP V I V +GER   KDN  +G+F+LT IPPAPRG PQI V FDIDANGILHVSA+D  +G + +I I    G L ++EI++M++
Sbjct:  297 TLTRAQFEHLASSLIERTKQPCAQALKDAKLSASDIDDVLLVGGMSRMPAVQAVVKEIF-GKEPNKGVNPDEVVAIGAAIQGGVLGGE----VKDVLLLDVIPLSLGIETLGGVMTPLVERNTTIPTQKKQIFSTAADNQPAVTIVVLQGERPMAKDNKEIGRFDLTDIPPAPRGHPQIEVTFDIDANGILHVSAKDAASGREQKIRIEASSG-LKEDEIQQMIR 515          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURP8 (Chaperone protein dnaK OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  DL  + +EP    ++D+ +   ++ DV+LVGG TR+PKVQ+ +++FF GK+  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS+ EIE+MV+
Sbjct:  301 ITRAKLEALVEDLIERTIEPCRVAIKDAGVKVGEIDDVILVGGQTRMPKVQEKVKEFF-GKDPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVSFDIDANGILHVGAKDKATGKENRITIKANSG-LSEAEIEKMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ANATD (Chaperone protein dnaK OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.714e-52
Identity = 116/224 (51.79%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+FEEL  DL  K  EPVE  L D+K+   Q+  V+LVGGSTRIP VQ+ ++    GKE  K INPDE           +L+G+    V+D           GIET GGV T +I RNTTIPT+K QIF+T  D Q  V I V +GER   KDN  LG+F L GIPPAPRGVPQI V FDIDANGI+HVSA+D   G + +ITIT+ +  LS+EEI+R ++
Sbjct:  271 LTRAKFEELIKDLVEKTREPVETALSDAKLTPEQIDKVILVGGSTRIPYVQEFVKKL-TGKEPFKGINPDECVAIGAAIQAGVLAGQ----VKDILLLDVTPLSLGIETLGGVFTKIIERNTTIPTRKSQIFTTAVDGQTQVEIHVLQGERPLAKDNKTLGRFILDGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGREQKITITS-QTHLSEEEIQRAIK 488          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHIME4.714e-5250.45Chaperone protein dnaK OS=Rhizobium meliloti GN=dn... [more]
DNAK_NEIMF4.714e-5251.79Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_KLEP74.714e-5249.55Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]
DNAK_ENT384.714e-5250.00Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_CHLTR4.714e-5248.89Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB4.714e-5248.89Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA4.714e-5248.89Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT24.714e-5248.89Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_BURP84.714e-5249.11Chaperone protein dnaK OS=Burkholderia phymatum (s... [more]
DNAK_ANATD4.714e-5251.79Chaperone protein dnaK OS=Anaerocellum thermophilu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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