FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig403 contig Ccv1_Contig403:50..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_DESHD (Chaperone protein dnaK OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 114/259 (44.02%), Postives = 153/259 (59.07%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            ITRA+FEEL  DL    + P  + L D+K+  ++V+ V+LVGGSTRIP VQ+ ++   +GKE  K +NPDE           +L+GE    V+D           GIET GGV T +I RNTT+PT K Q+FST +D+Q  V I V +GER     N  LG+F+L+GIPPAPRG+PQI V FDIDANGI+HVSA+D   G + ++TIT   G LS+EEIE+M +                   N  ++  Y    T++D
Sbjct:  271 ITRAKFEELTADLVEATLGPTRQALADAKLSWNEVNQVILVGGSTRIPAVQEAIKKL-SGKEPHKGVNPDEVVALGAAIQGGVLAGE----VKDIILVDVTPLSLGIETLGGVFTRIIDRNTTVPTTKSQVFSTAADSQTSVDIHVLQGEREMAAYNKTLGRFQLSGIPPAPRGIPQIEVKFDIDANGIVHVSAKDMATGNEQKVTITASTG-LSQEEIEKMKKDAEAHADEDKKRKELIDAKNQADSMVYQTEKTLKD 523          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_DESAD (Chaperone protein dnaK OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 115/259 (44.40%), Postives = 155/259 (59.85%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            I+RA+ E+L  DL  +   P +K L+D+ +  + + +V+LVGG TR+P VQQ +Q+FF GKE  +S+NPDE           IL+G+    V+D           GIET GGV T LI RNTTIPT+K Q+F+T +DNQP V I V +GER    DN  LG+FELTG+P APRGVPQI V FDIDANGI++VSA+D   G +  I IT   G LS+E+IE+MV+                   N  ++  Y    ++R+
Sbjct:  294 ISRAKLEKLVEDLVERTKVPCQKALKDAGLTAADIDEVILVGGMTRMPLVQQKVQEFF-GKEPNRSVNPDEVVAMGASIQGGILAGD----VKDVLLLDVTPLSLGIETMGGVFTNLIERNTTIPTRKSQVFTTAADNQPSVSIHVLQGERPMAADNMTLGRFELTGLPAAPRGVPQIEVTFDIDANGIVNVSAKDMGTGKEQSIQITASSG-LSEEDIEKMVKDAESHAEDDKKKQALIEARNQADSLIYTTEKSLRE 546          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BURVG (Chaperone protein dnaK OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 110/224 (49.11%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  DL  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ+ +++FF GKE  + +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPTK  Q++ST  DNQ  V I+V++GER     N LLG+F L GIPPAPRGVPQI V FDIDANGILHV A+DK  G +N+ITI  + G LS  EI++M++
Sbjct:  301 ITRAKLEALVEDLVERTIEPCRIAIKDAGVKVSDIDDVILVGGQTRMPKVQEKVKEFF-GKEPRRDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKHSQVYSTADDNQSAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LSDAEIDQMIK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BRUSU (Chaperone protein dnaK OS=Brucella suis GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ++RA+FE L  DL ++ +EP +  L+D+ +   ++ +VVLVGG TR+PK+Q++++ FF GKE  K +NPDE           +L G+    V+D           GIET GGV T LI RNTTIPTKK Q FST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI++VSA+DK  G ++QI I    G L+  +IE+MV+
Sbjct:  295 LSRAKFESLVDDLVQRTVEPCKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFF-GKEPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLTDADIEKMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 113/225 (50.22%), Postives = 148/225 (65.78%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE++   L +K  EP  K ++D+ +  S +++V+LVGGSTRIP +Q+++++ F G+E  K +NPDE           IL+GE  + V             GIET GGVMT LI RNTTIPTKK Q+FST +DNQ  V I+V +GER     N +LG F L GIP APRGVPQI V FDIDANGI+HVSA+D   G + +I I +  G LS+EEIERMV+
Sbjct:  294 TLTRAKFEQMVDHLVQKTKEPCLKAIKDAGLKASDINEVILVGGSTRIPAIQKIVKEIF-GQEPNKGVNPDEAVAIGAAIQGGILTGEAKDMV----LLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQTSVDIKVLQGEREMASQNRVLGNFILDGIPAAPRGVPQIEVSFDIDANGIVHVSAKDMGTGKEQKIRIESSSG-LSEEEIERMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BORPE (Chaperone protein dnaK OS=Bordetella pertussis GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  +L  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ  +++FF G+E  K +NPDE           +LSGE     +D           GIET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGILHVSA+DK  G +N+ITI  + G LS++EI+RMV+
Sbjct:  301 ITRAKLEALVEELIERTIEPCRVAIKDAGVKVSDIDDVILVGGMTRMPKVQDKVKEFF-GREPRKDVNPDEAVAAGAAIQGSVLSGER----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BORPA (Chaperone protein dnaK OS=Bordetella parapertussis GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  +L  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ  +++FF G+E  K +NPDE           +LSGE     +D           GIET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGILHVSA+DK  G +N+ITI  + G LS++EI+RMV+
Sbjct:  301 ITRAKLEALVEELIERTIEPCRVAIKDAGVKVSDIDDVILVGGMTRMPKVQDKVKEFF-GREPRKDVNPDEAVAAGAAIQGSVLSGER----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 113/225 (50.22%), Postives = 148/225 (65.78%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            T+TRA+FE++   L +K  EP  K ++D+ +  S +++V+LVGGSTRIP +Q+++++ F G+E  K +NPDE           IL+GE  + V             GIET GGVMT LI RNTTIPTKK Q+FST +DNQ  V I+V +GER     N +LG F L GIP APRGVPQI V FDIDANGI+HVSA+D   G + +I I +  G LS+EEIERMV+
Sbjct:  294 TLTRAKFEQMVDHLVQKTKEPCLKAIKDAGLKASDINEVILVGGSTRIPAIQKIVKEIF-GQEPNKGVNPDEAVAIGAAIQGGILTGEAKDMV----LLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQTSVDIKVLQGEREMASQNRVLGNFILDGIPAAPRGVPQIEVSFDIDANGIVHVSAKDMGTGKEQKIRIESSSG-LSEEEIERMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BORBR (Chaperone protein dnaK OS=Bordetella bronchiseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  +L  + +EP    ++D+ +  S + DV+LVGG TR+PKVQ  +++FF G+E  K +NPDE           +LSGE     +D           GIET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGILHVSA+DK  G +N+ITI  + G LS++EI+RMV+
Sbjct:  301 ITRAKLEALVEELIERTIEPCRVAIKDAGVKVSDIDDVILVGGMTRMPKVQDKVKEFF-GREPRKDVNPDEAVAAGAAIQGSVLSGER----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: HSP7M_PEA (Heat shock 70 kDa protein, mitochondrial OS=Pisum sativum GN=HSP1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 117/265 (44.15%), Postives = 157/265 (59.25%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD--EKI 847
            T+TR++FE L  +L  +   P + CL+D+ I    V +V+LVGG TR+PKVQQ++ + F GK   K +NPDE           IL G+    V++           GIET GG+ T LI RNTTIPTKK Q+FST +DNQ  V I+V +GER    DN  LG+F+L GIPPAPRG+PQI V FDIDANGI+ VSA+DK+ G + QITI    G LS +EI++MV+                   NS +   Y++  ++ +  EKI
Sbjct:  343 TLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQQVVSEIF-GKSPSKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-RSSGGLSDDEIDKMVKEAELHAQRDQERKALIDIRNSADTSIYSIEKSLAEYREKI 601          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_DESHD6.156e-5244.02Chaperone protein dnaK OS=Desulfitobacterium hafni... [more]
DNAK_DESAD6.156e-5244.40Chaperone protein dnaK OS=Desulfovibrio salexigens... [more]
DNAK_BURVG6.156e-5249.11Chaperone protein dnaK OS=Burkholderia vietnamiens... [more]
DNAK_BRUSU6.156e-5249.55Chaperone protein dnaK OS=Brucella suis GN=dnaK PE... [more]
DNAK_BORRA6.156e-5250.22Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]
DNAK_BORPE6.156e-5250.00Chaperone protein dnaK OS=Bordetella pertussis GN=... [more]
DNAK_BORPA6.156e-5250.00Chaperone protein dnaK OS=Bordetella parapertussis... [more]
DNAK_BORDL6.156e-5250.22Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK_BORBR6.156e-5250.00Chaperone protein dnaK OS=Bordetella bronchiseptic... [more]
HSP7M_PEA8.041e-5244.15Heat shock 70 kDa protein, mitochondrial OS=Pisum ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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