FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/224 (50.45%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + + P +K L D+ +  SQ+ +VVLVGG TR+PKV + +++FF GK+  + +NPDE           I+ G+    V+D           GIET GGV T LI RNTTIPTKK Q+FST  DNQ  V I+V++GER    DN LLG+F L GIPPAPRGVPQI V FDIDANGI HVSA+DK  G + +I I    G LS++EI RMV+
Sbjct:  294 LTRAKLESLVNDLIERTIIPCKKALEDAGLSASQIGEVVLVGGMTRMPKVIEKVKEFF-GKDPHRGVNPDEVVAIGAAIQAGIIQGD----VRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAEDNQTAVTIKVHQGERKLAIDNKLLGQFSLEGIPPAPRGVPQIEVTFDIDANGIAHVSAKDKATGKEQKIRI-QSSGGLSEDEINRMVR 511          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_WIGBR (Chaperone protein dnaK OS=Wigglesworthia glossinidia brevipalpis GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 116/261 (44.44%), Postives = 156/261 (59.77%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRDEK 844
            +TRA+ E L  +L  K +EPV+  L+D+K+    + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  QIFST  DNQ  V I V +GER R+ DN  LG+F L GI PA RG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G LS+ EI++M++                   N  ++  ++ R  +++ K
Sbjct:  304 VTRAKLESLVEELIYKTLEPVKTSLKDAKLKIIDIKDVILVGGQTRMPLVQKKVSDFF-GKEPRKDVNPDEAVAIGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTTLISKNTTIPTKHSQIFSTAEDNQSAVTIHVLQGERKRSIDNKSLGQFNLDGIAPAMRGMPQIEVTFDIDADGILHVSAKDKNSGREQKITIKASSG-LSENEIDKMLKESEANAELDIKFEELVKTKNQADHLLHSTRKQIKEAK 558          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_TREPS (Chaperone protein dnaK OS=Treponema pallidum subsp. pallidum (strain SS14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/260 (43.46%), Postives = 150/260 (57.69%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            T++R+ FE++  DLF +  EP  K L+D+ I   ++ +++LVGGSTR+PKV  +++D F GKE  K +NPDE           IL G+    V+D           GIET GGV T LI RNTTIPT+K Q+FST +D Q  V I V +GER     N  LG F+L GIPPAPRGVPQI V FDIDANGI+HVSA+D   G +  I I +  G LS+ EI+RMV+                   N  ++  Y    T+++
Sbjct:  293 TLSRSEFEKMTDDLFERTKEPCRKALKDAGISADRIDEILLVGGSTRMPKVAHVIKDVF-GKEGSKGVNPDEAVAIGAAIQGGILGGD----VKDVLLLDVTPLSLGIETMGGVFTPLISRNTTIPTRKSQVFSTAADGQTAVSIHVLQGERGMANQNRTLGNFDLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQHIRIESSSG-LSESEIDRMVKEAEANAESDKREREKIEARNVADSLIYQTEKTLKE 546          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_TREPA (Chaperone protein dnaK OS=Treponema pallidum GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/260 (43.46%), Postives = 150/260 (57.69%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            T++R+ FE++  DLF +  EP  K L+D+ I   ++ +++LVGGSTR+PKV  +++D F GKE  K +NPDE           IL G+    V+D           GIET GGV T LI RNTTIPT+K Q+FST +D Q  V I V +GER     N  LG F+L GIPPAPRGVPQI V FDIDANGI+HVSA+D   G +  I I +  G LS+ EI+RMV+                   N  ++  Y    T+++
Sbjct:  293 TLSRSEFEKMTDDLFERTKEPCRKALKDAGISADRIDEILLVGGSTRMPKVAHVIKDVF-GKEGSKGVNPDEAVAIGAAIQGGILGGD----VKDVLLLDVTPLSLGIETMGGVFTPLISRNTTIPTRKSQVFSTAADGQTAVSIHVLQGERGMANQNRTLGNFDLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQHIRIESSSG-LSESEIDRMVKEAEANAESDKREREKIEARNVADSLIYQTEKTLKE 546          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_THISH (Chaperone protein dnaK OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 111/224 (49.55%), Postives = 142/224 (63.39%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  +L ++ +EP +  L+D+ +  S + DV+LVGG TR+PKVQ  +++FF GKE  K +NPDE           +L GE    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V + V +GER     N  LG+F+LT IPPAPRGVPQ+ V FDIDANGIL+VSA+DK  G +  I I    G LS EE+ERMV+
Sbjct:  300 VTRAKLESLVEELIKRTIEPCKVALKDAGLSVSDIDDVILVGGQTRMPKVQDAVKNFF-GKEPRKDVNPDEAVAVGAAIQAGVLGGE----VKDVLLLDVTPLSLGIETLGGVMTKLIEKNTTIPTKATQVFSTADDNQTAVTVHVLQGEREMASANKSLGRFDLTDIPPAPRGVPQVEVMFDIDANGILNVSAKDKATGKQQSIVIKASSG-LSDEEVERMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPB (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 110/224 (49.11%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+FE L  DL +K +EP  K L+D+ +   ++ +VVLVGG TR+PKVQ++++  F GKE  K +NPDE           +L G+    V+D           GIET GGV T +I RNTTIPTKK Q+FST  DNQ  V I+V++GER    DN +LG+F+L GIPP+PRG+PQI V FDIDANGI++VSA DK  G + QI I    G LS+ +I +MV+
Sbjct:  295 LTRAKFEALVDDLVQKTIEPCRKALKDAGLTAGEIGEVVLVGGMTRMPKVQEVVKQLF-GKEPHKGVNPDEVVAIGAAIQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRIIERNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKILGQFDLMGIPPSPRGMPQIEVTFDIDANGIVNVSARDKATGKEQQIRI-QASGGLSEADINKMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_PROA2 (Chaperone protein dnaK OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 110/222 (49.55%), Postives = 145/222 (65.32%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERM 727
            +TRA+FE L   LF   M P ++ ++++K++ S++ +VVLVGGSTRIPKVQ+L+++ F  +E  KS+NPDE           +L+GE    V D           GIET GGVMT LI  NTTIPTKK+++FST +DNQ  V + V +GER    DN  LG+F L  IPPAPRG+PQ+ V FDIDANGILHVSA+DK  G +  I I    G+L+  EIE+M
Sbjct:  293 LTRAKFEALASTLFDNIMAPCKRAIKNAKVNISEIDEVVLVGGSTRIPKVQELVKELFK-REPNKSVNPDEVVAVGAAIQGGVLTGE----VSDVLLLDVTPLSLGIETLGGVMTKLIEANTTIPTKKQEVFSTAADNQTSVEVHVLQGERPMASDNKTLGRFHLGDIPPAPRGMPQVEVAFDIDANGILHVSAKDKATGKEQSIRI-EAGGKLNDAEIEKM 508          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_METTP (Chaperone protein dnaK OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=dnaK PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 114/260 (43.85%), Postives = 153/260 (58.85%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNTVRD 838
            TITRA+ EEL  D+  +C  P+E+ L D+K+ KS +  ++LVGG TR+P VQ+ ++    GK++ + ++P E           +L+GE    V+D           G+ET GG+MT LI RNTTIPT+K QIF+T +DNQ  V I V +GER   KDN  LG+F L GIPPAPRG+PQI V FDIDANGILHVSA+D     + +ITIT    RLSKEEIE+ V+                   N  +N  Y     +++
Sbjct:  274 TITRAKLEELIQDVLERCRGPMEQALSDAKLSKSDIDKIILVGGPTRMPAVQEFVKRVM-GKDVERGVDPMECVAMGAAIQAGVLAGE----VKDILLLDVTPLSLGVETLGGIMTRLIERNTTIPTRKSQIFTTAADNQTSVEIHVLQGERPLAKDNISLGRFTLVGIPPAPRGIPQIEVTFDIDANGILHVSAKDLATKKEQRITITAPH-RLSKEEIEQKVKEAERYAQEDARRREEIETRNQADNLIYTTEKMLKE 527          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 110/224 (49.11%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ++RA+FE L  DL ++ +EP  K L+D+ +  S++ +VVLVGG  R+PK+Q++++ FF GKE  K +NPDE           +L G+    V+D           GIET GGV T LI RNTTIPTKK Q FST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRG+PQI V FDIDANGI++V+A+DK    ++QI I    G LS  +I+RMV+
Sbjct:  295 LSRAKFESLVDDLVQRTIEPCRKALKDAGVSASEIDEVVLVGGMIRMPKIQEVVKSFF-GKEPHKGVNPDEVVAIGAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGMPQIEVTFDIDANGIVNVTAKDKATNKEHQIRI-QASGGLSDADIDRMVK 512          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_HAES2 (Chaperone protein dnaK OS=Haemophilus somnus (strain 2336) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/224 (50.45%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + MEPV+  L D+ +  S+++DV+LVGG TR+P VQQ + +FF GKE  + +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTKK Q+FST  DNQ  V I V +GER +   N  LG+F L GI PAPRG+PQI V FDIDA+GI+HVSA+DK  G + +ITI    G LS EEI++MV+
Sbjct:  300 LTRAKLEALVEDLVARSMEPVKVALSDAGLSVSEINDVILVGGQTRMPLVQQKVAEFF-GKEPRRDVNPDEAVAIGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDADGIIHVSAKDKGTGKEQKITIKASSG-LSDEEIQQMVR 517          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_WOLPP8.041e-5250.45Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_WIGBR8.041e-5244.44Chaperone protein dnaK OS=Wigglesworthia glossinid... [more]
DNAK_TREPS8.041e-5243.46Chaperone protein dnaK OS=Treponema pallidum subsp... [more]
DNAK_TREPA8.041e-5243.46Chaperone protein dnaK OS=Treponema pallidum GN=dn... [more]
DNAK_THISH8.041e-5249.55Chaperone protein dnaK OS=Thioalkalivibrio sp. (st... [more]
DNAK_RHOPB8.041e-5249.11Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_PROA28.041e-5249.55Chaperone protein dnaK OS=Prosthecochloris aestuar... [more]
DNAK_METTP8.041e-5243.85Chaperone protein dnaK OS=Methanosaeta thermophila... [more]
DNAK_METRJ8.041e-5249.11Chaperone protein dnaK OS=Methylobacterium radioto... [more]
DNAK_HAES28.041e-5250.45Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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