FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig403 contig Ccv1_Contig403:50..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_HAES1 (Chaperone protein dnaK OS=Haemophilus somnus (strain 129Pt) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/224 (50.45%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + MEPV+  L D+ +  S+++DV+LVGG TR+P VQQ + +FF GKE  + +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTKK Q+FST  DNQ  V I V +GER +   N  LG+F L GI PAPRG+PQI V FDIDA+GI+HVSA+DK  G + +ITI    G LS EEI++MV+
Sbjct:  300 LTRAKLEALVEDLVARSMEPVKVALSDAGLSVSEINDVILVGGQTRMPLVQQKVAEFF-GKEPRRDVNPDEAVAIGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDADGIIHVSAKDKGTGKEQKITIKASSG-LSDEEIQQMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIG (Chaperone protein dnaK OS=Haemophilus influenzae (strain PittGG) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/224 (50.45%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  DL    +E ++  L+D+    S++HD++LVGG TR+P VQQ + +FF GKE  K +NPDE           +L G+    V+D           GIET GGVMTTLI +NTTIPTKK Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDANG+++VSA+DK  G + QI I    G LS EEI++MV+
Sbjct:  299 ITRAKLEALVEDLVASSIESLKTVLKDAGKGVSEIHDIILVGGQTRMPLVQQKVAEFF-GKEARKDVNPDEAVAIGAAVQGGVLKGD----VKDILLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSG-LSDEEIQQMVR 516          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIE (Chaperone protein dnaK OS=Haemophilus influenzae (strain PittEE) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 113/224 (50.45%), Postives = 143/224 (63.84%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  DL    +E ++  L+D+    S++HD++LVGG TR+P VQQ + +FF GKE  K +NPDE           +L G+    V+D           GIET GGVMTTLI +NTTIPTKK Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDANG+++VSA+DK  G + QI I    G LS EEI++MV+
Sbjct:  299 ITRAKLEALVEDLVASSIESLKAVLKDAGKGVSEIHDIILVGGQTRMPLVQQKVAEFF-GKEARKDVNPDEAVAIGAAVQGGVLKGD----VKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSG-LSDEEIQQMVR 516          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_FUSNN (Chaperone protein dnaK OS=Fusobacterium nucleatum subsp. nucleatum GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 109/224 (48.66%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+F +L   L      P +  L+D+ ++ +Q+ +++LVGGSTRIP VQ+ +++FF GK+  K INPDE           +L G+    V+D           GIET GGV T +I +NTTIP KK Q++ST  DNQP V I V +GER+R  DN+ LG+F L GIP APRGVPQI V FDIDANGI+HVSA+D   G +N++TI+     LSKEEIERM +
Sbjct:  271 LTRAKFNDLTKHLVEATQGPTKTALKDASLEANQIDEILLVGGSTRIPAVQEWVENFF-GKKPNKGINPDEVVAAGAAIQGGVLMGD----VKDVLLLDVTPLSLGIETLGGVFTKMIEKNTTIPVKKSQVYSTAVDNQPAVTINVLQGERSRATDNHKLGEFNLEGIPAAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKENKVTISG-SSNLSKEEIERMTK 488          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ENTS8 (Chaperone protein dnaK OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S ++DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L++EEI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEEEIQKMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 112/224 (50.00%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  +L  + MEP++  L+D+ +  S + DV+LVGG TR+P VQ+ + DFF GKE  K +NPDE           +L+G+    V+D           GIET GGVMT LI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G +  ITI    G LS++EI++MV+
Sbjct:  300 VTRAKLESLVEELVARSMEPLKVALKDAGLSVSDIDDVILVGGQTRMPMVQKQVADFF-GKEPRKDVNPDEAVAIGAAVQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGIQPAPRGMPQIEVTFDIDADGILHVSAKDKNSGREQNITIKASSG-LSEDEIKQMVR 517          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CYTH3 (Chaperone protein dnaK OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 111/223 (49.78%), Postives = 146/223 (65.47%), Query Frame = 2
Query:   59 TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERM 727
            T+TRA+FE+L   L ++ ++P ++ L+D+ +   Q+ +V+LVGGSTRIP++Q+ ++ FF GK+  K +NPDE           +L+GE    V D           GIET GGV T LI  NTTIP+KK ++FST SDNQP V I V +GERA  KDN  +G+F L  IPPAPR VPQI V FDIDANGIL+VSA+DK  G + +I I    G LS +EIERM
Sbjct:  293 TLTRAKFEQLADSLIKRTLDPCKQALKDAGLSIGQIDEVILVGGSTRIPRIQEEVEKFF-GKKPSKGVNPDEVVALGAAIQGGVLTGE----VTDVLLLDVIPLSLGIETMGGVFTKLIEANTTIPSKKSEVFSTASDNQPSVEIHVLQGERAFAKDNRSIGRFHLGDIPPAPRNVPQIEVTFDIDANGILNVSAKDKGTGKEQKIRIEASSG-LSADEIERM 509          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_CORA7 (Chaperone protein dnaK OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 119/269 (44.24%), Postives = 153/269 (56.88%), Query Frame = 2
Query:   17 IEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMR 823
            I +DS    +    T++R  F+++  DL  +   P  + ++D+ +  S+V  VVLVGGSTR+P V  L+++   GK+  K +NPDE           +L GE    V+D           GIET GGVMT LI RNTTIPTKK + F+T  DNQP V IQVY+GER     N LLG FEL GI PAPRGVPQI V FDIDANGI+ VSA+DK  G +N I I +  G LS+EEI+RMV+                   N  E+ +Y  R
Sbjct:  258 ITVDSEKNPLFLDETLSRTEFQKITQDLLDRTKTPFNQVIKDAGLSLSEVDHVVLVGGSTRMPAVSDLVKEM-TGKDPNKGVNPDEVVAVGAALQAGVLRGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKKSETFTTADDNQPSVQIQVYQGEREMASANKLLGSFELGGIAPAPRGVPQIEVTFDIDANGIVSVSAKDKATGKENTIKIQDGSG-LSQEEIDRMVKDAEAHAEEDKKRREEQETRNQAESTSYQTR 520          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_BORPD (Chaperone protein dnaK OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 110/224 (49.11%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+ E L  +L  + ++P    ++D+ +  S++ DV+LVGG TR+PKVQ+ +++FF GK+  K +NPDE           +LSG+     +D           GIET GGVMT +I +NTTIPT+  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGILHVSA+DK  G +N+ITI  + G LS++EI+RMV+
Sbjct:  301 ITRAKLEALVEELIERTIDPCRVAIKDAGVKVSEIDDVILVGGMTRMPKVQEKVKEFF-GKDPRKDVNPDEAVAAGAAIQGSVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRFSQTFSTADDNQPAVTIKVFQGEREIAAGNKSLGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVK 518          
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_AMOA5 (Chaperone protein dnaK OS=Amoebophilus asiaticus (strain 5a2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.041e-52
Identity = 111/224 (49.55%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            ITRA+FE+L   L R+ +EP +K ++D+ +  + + +V+LVGGSTRIPK+Q+ ++ FFN K+  K +NPDE           +L+GE    V+D           GIET GGV T LI  NTTIPTKK ++FST +D+Q  V I V +GERA  +DN  +GKF L GIPPAPRG+PQI V FDIDANGIL+VSA+DK  G + +I I    G L+ EEI++M Q
Sbjct:  296 ITRAQFEQLVDGLVRRTLEPCKKAMQDAGLTVADIDEVILVGGSTRIPKIQEEVEKFFN-KKPSKGVNPDEVVAVGAAIQGGVLTGE----VKDVLLLDVIPLSFGIETLGGVYTKLIEANTTIPTKKSEVFSTAADSQSSVEIHVLQGERAMARDNRTIGKFHLDGIPPAPRGIPQIEVTFDIDANGILNVSAKDKGTGKEQKIRIEASSG-LTDEEIKKMKQ 513          
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HAES18.041e-5250.45Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_HAEIG8.041e-5250.45Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_HAEIE8.041e-5250.45Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_FUSNN8.041e-5248.66Chaperone protein dnaK OS=Fusobacterium nucleatum ... [more]
DNAK_ENTS88.041e-5249.55Chaperone protein dnaK OS=Enterobacter sakazakii (... [more]
DNAK_EDWI98.041e-5250.00Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
DNAK_CYTH38.041e-5249.78Chaperone protein dnaK OS=Cytophaga hutchinsonii (... [more]
DNAK_CORA78.041e-5244.24Chaperone protein dnaK OS=Corynebacterium aurimuco... [more]
DNAK_BORPD8.041e-5249.11Chaperone protein dnaK OS=Bordetella petrii (strai... [more]
DNAK_AMOA58.041e-5249.55Chaperone protein dnaK OS=Amoebophilus asiaticus (... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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