FC877802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.302e-84 Identity = 167/261 (63.98%), Postives = 185/261 (70.88%), Query Frame = 3 Query: 111 MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNL--REPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 MD GD +DIEVEGG +G ER SG +D ++ R+PLL + R NTTSQIAIVGAN CPIESLDYEI EN+ FKQDWR+R+K+EI QY KW LA LIG+ TGL N VENIAGFKLLLI NLML +++F F A GSGIPEVKAYLNGIDA+SILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKY LTW+WLR+FKNDRDR Sbjct: 1 MDDRHEGDH--HDIEVEGGALHG---------FERKISGILDDGSVGFRQPLLARNRKNTTSQIAIVGANTCPIESLDYEIFENDFFKQDWRSRKKIEILQYTFLKWALAFLIGLATGLVGFLNNLGVENIAGFKLLLIGNLMLKEKYFQAFFAFAGCNLILATAAASLCAFIAPAAAGSGIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYRLTWKWLRFFKNDRDR 250
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.954e-64 Identity = 124/226 (54.87%), Postives = 154/226 (68.14%), Query Frame = 3 Query: 216 MGSGTSEDHNLREPLL--LKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 M + T+ED ++ PLL L+ TN+TSQ+AIVGAN+CPIESLDYEI EN+ FKQDWR R KVEIFQYV KW L IG++ L N VEN+AG K ++ +N+M+ R MGFV + GSGIPEVKAYLNG+DA I + TL +KI G+I V+A ++GK GPMVHTGAC+A++LGQGGSK+Y LTWRWLR+FKNDRDR Sbjct: 1 MPNSTTED-SVAVPLLPSLRRATNSTSQVAIVGANVCPIESLDYEIAENDFFKQDWRGRSKVEIFQYVFMKWLLCFCIGIIVSLIGFANNLAVENLAGVKFVVTSNMMIAGRFAMGFVVFSVTNLILTLFASVITAFVAPAAAGSGIPEVKAYLNGVDAPEIFSLRTLIIKIIGNISAVSASLLIGKAGPMVHTGACVASILGQGGSKRYRLTWRWLRFFKNDRDR 225
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCA_ARATH (Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 1.449e-59 Identity = 115/250 (46.00%), Postives = 154/250 (61.60%), Query Frame = 3 Query: 138 EENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 E+ ++++ +NG E E E++ L +PLL + RT +++ +A+VGA + IESLDYEI EN+LFK DWR+R K ++FQY+ KWTLA L+G+ TGL A N VENIAG+KLL + + DR + G + T G GIPE+KAYLNGID ++ +T+ VKI GSI VAAG +GKEGP+VH G+CIA+LLGQGG + + WRWLRYF NDRDR Sbjct: 3 EDGNLQISNSNYNGEEEGE-----------DPENNTLNQPLLKRHRTLSSTPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKAQVFQYIFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGYYIAQDRFWTGLMVFTGANLGLTLVATVLVVYFAPTAAGPGIPEIKAYLNGIDTPNMFGFTTMMVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRDR 241
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCB_ARATH (Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.772e-57 Identity = 113/249 (45.38%), Postives = 149/249 (59.84%), Query Frame = 3 Query: 141 ENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 E D+ GG N + E G E + L +PL+ RT +++ +A+VGA + IESLDYEI EN+LFK DWR R K ++ QYV KWTLA L+G+ TGL A N VENIAG+KLL + + + +R+ G + G GIPE+KAYLNG+D ++ +T+ VKI GSI VAAG +GKEGP+VH G+CIA+LLGQGG+ + + WRWLRYF NDRDR Sbjct: 3 EEDLNQIGGNSNYNGEG-----------GDPESNTLNQPLVKANRTLSSTPLALVGAKVSHIESLDYEINENDLFKHDWRKRSKAQVLQYVFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGHFLTQERYVTGLMVLVGANLGLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGTDNHRIKWRWLRYFNNDRDR 240
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 4.684e-42 Identity = 91/188 (48.40%), Postives = 113/188 (60.11%), Query Frame = 3 Query: 324 IESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 + SLDYE++EN ++++ R K+ + YV KW +LLIG+ TGLAAVF N VEN AG+K L ++ +F GF+ GSGIPE+K YLNGID L TL KIFGSI V G +GKEGP+VHTGACIA+LLGQGGS KYHL RW + FK+DRDR Sbjct: 44 VNSLDYEVIENYAYREEQAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFAL-TFAIIQKSYFAGFIVYLLINLVLVFSSAYIITQFAPAAAGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWPQLFKSDRDR 230
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCN7_RAT (H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22 Identity = 61/191 (31.94%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 327 ESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLM--LNDRHFMGF--VANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 ESLDY+ EN+LF ++ R + +W + LIG+LTGL A F + VEN+AG K +I + + ++ + F + + GSGIP++K +LNG+ ++ TL +K+ G I V G VGKEGPM+H+G+ IA + QG S ++ YF+ D ++ Sbjct: 93 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKDNIDKFTEKGGLSFSLLLWATLNSAFVLVGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEK 283
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCN7_MOUSE (H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22 Identity = 61/191 (31.94%), Postives = 96/191 (50.26%), Query Frame = 3 Query: 327 ESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLM--LNDRHFMGF--VANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 ESLDY+ EN+LF ++ R + +W + LIG+LTGL A F + VEN+AG K +I + + ++ + F + + GSGIP++K +LNG+ ++ TL +K+ G I V G VGKEGPM+H+G+ IA + QG S ++ YF+ D ++ Sbjct: 93 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKDNIDKFTEKGGLSFSLLLWATLNSAFVLVGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEK 283
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCN7_HUMAN (H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.417e-22 Identity = 61/191 (31.94%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 327 ESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLM--LNDRHFMGF--VANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 ESLDY+ EN+LF ++ R + +W + LIG+LTGL A F + VEN+AG K +I + ++ + F + + GSGIP++K +LNG+ ++ TL +K+ G I V G VGKEGPM+H+G+ IA + QG S ++ YF+ D ++ Sbjct: 95 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKGNIDKFTEKGGLSFSLLLWATLNAAFVLVGSVIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEK 285
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCN7_BOVIN (H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 327 ESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLI-NNLMLNDRH---FMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 ESLDY+ EN+LF ++ R + +W + ++G+LTGL A F + VE +AG K L+ +N+ H + + GSGIP++K +LNG+ ++ TL +K+ G I V G VGKEGPM+H+G+ IA + QG S ++ YF+ D ++ Sbjct: 99 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICAMVGILTGLVACFIDIVVEKLAGLKYRLVKDNIDRFTEHGGLSFSLLLWAALNAAFVLLGSTIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEK 289
BLAST of FC877802 vs. ExPASy Swiss-Prot
Match: CLCA_DICDI (Chloride channel protein A OS=Dictyostelium discoideum GN=clcA PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 3 Query: 327 ESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDR 887 ESLD+ I++N+++++ R K+ KW + +IGVL G+ A VE + FK + ++R F+ F+ S GSGIPEVK YLNGI + TL K+ I ++G ++G EGPM+H G+ + +GQ SK + L + NDRDR Sbjct: 96 ESLDFPIIDNQIYREYIRRTSKLNHMLKTFGKWIICFMIGVLVGITAYLVKQSVEFVNEFKFDQSGKYLEDERKFIAFLVYYSINILFGVSASLVIIPVGQIASGSGIPEVKGYLNGIRIPQSMNVKTLVGKLVSLILAYSSGLILGPEGPMIHIGSMLGGAIGQVKSKTLKWYPKVLWKYHNDRDR 282 The following BLAST results are available for this feature:
BLAST of FC877802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877802 ID=FC877802; Name=FC877802; organism=Citrus clementina; type=EST; length=887bpback to top |