FC877805

Overview
NameFC877805
Unique NameFC877805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.215e-26
Identity = 79/228 (34.65%), Postives = 109/228 (47.81%), Query Frame = 1
Query:  229 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            +++K  KTY   EE   R  V++ N +  +          H  T     F DLT  EF +   G  R+       +K  I   +    +P   DWR  G VT VK+QG C S W+FSATG+LEG  F  T  L+ LSEQ L+DC          +   GC+GG M  AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +   + K GP+
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQ-----KIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG-QGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPI 245          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.116e-26
Identity = 80/229 (34.93%), Postives = 110/229 (48.03%), Query Frame = 1
Query:  229 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNR----RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            +++K  K Y   EE   R  V++ N +  +          H  T     F DLT +EF +   G  R    R+ +  D Q   +      P   DWR  G VT VK+QG C S W+FSATG+LEG  F  TG LV LSEQ L+DC          +    C+GG M +AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +   + K GP+
Sbjct:   32 WRTKHGKAYNVNEER-LRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLYV------PKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIG-PGRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPI 245          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.060e-25
Identity = 75/241 (31.12%), Postives = 113/241 (46.89%), Query Frame = 1
Query:  187 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA---DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            S+D L + E    LF S   K +K Y + +E  YRF +F+ NL         + +   G+  F+DL+  EF+++++G            D +        + P   DWR  GAVT VK+QGACGSCW+FS    +EG + + TG L+ LSEQ+LVDCD             GC GG   ++ +Y+    GV   K YPY          DK      ++ +  + S+ +      + + PL
Sbjct:   34 SQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVAN-NGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPL 264          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.060e-25
Identity = 56/140 (40.00%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  472 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            LP+  DWR  GAV  +K+Q  CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+YI+  GG++ +++YPY+    GSCK  + ++  +++ F  ++ + +    + V   P+
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ-GSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPV 129          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.808e-25
Identity = 74/234 (31.62%), Postives = 118/234 (50.43%), Query Frame = 1
Query:  202 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRD-HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            L  +  F LF+ +F+++Y    E+  R  +F  NL +A+R Q  D  TA  G T FSDLT  EF + +       R P   +K       + +P   DWR     ++ VK+QG+C  CW+ +A   ++    +   + V +S Q+L+DC+          C +GCNGG +  A+  +L   G+  EKDYP+ G      C   K K  A + +F+++S++E  +A  L  HGP+
Sbjct:   34 LELKEVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYGQERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPI 258          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.808e-25
Identity = 77/244 (31.56%), Postives = 120/244 (49.18%), Query Frame = 1
Query:  202 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTN-----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            L+ +  +  +K K+ K Y+ +EE   R  V++ N+++     +   L   T    +  F+D+T  EF+   +G      N   RL   A  +   P +      LP   DWR+ G VT V+ QG C SCW+F  TGA+EG  F  TG+L+ LS Q L+DC            + GC  G   +AF+Y+L  GG+E E  YPY   + G C+++    +A ++ F V+   ED +   +   GP+
Sbjct:   23 LSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGS-FFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDC-------SKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE-GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPI 256          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.084e-25
Identity = 77/217 (35.48%), Postives = 111/217 (51.15%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 855
            ++ +K K+++ Y  Q +  YR++VF  NL   RA      + T    + +F+D++  EF + +L L    ++P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +       LSEQ LVDC    D       + GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F  I S ++
Sbjct:   26 YANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSL----KVPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFKDIDSCDE 229          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.028e-25
Identity = 79/241 (32.78%), Postives = 120/241 (49.79%), Query Frame = 1
Query:  193 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            D  L+AE  +  +K K++K+Y+ +EE   R  V++  L+  K     +    +G T    +F D T  EFR+  + ++    R  +     +   ILP        DWR  G VT V+ QG C +CW+F+ TGA+E      TG+L  LS Q LVDC            ++GC GG   +AF+Y+L  GG+E E  YPY G D G C+++     A ++ F  +   ED + A +   GP+
Sbjct:   22 DSSLDAE--WQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSILPKF-----VDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDC-------SKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD-GPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPI 246          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.974e-25
Identity = 76/238 (31.93%), Postives = 118/238 (49.58%), Query Frame = 1
Query:  202 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-----LPTDFDWRD-HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            L  +  F+LF+ +++++Y+  EE+  R  +F  NL +A++ +  D  TA  GVT FSDLT  EF R    L    R+  +A K      ++     +P   DWR   G ++ VK Q +C  CW+ +A G +E    +   + V LS Q+L+DC         G C  GC GG +  AF  +L   G+  EKDYP+ G      C   K    A + +F ++  +E ++A  L   GP+
Sbjct:   36 LELKQAFTLFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEFGR----LYGHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC---------GRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPI 260          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.531e-24
Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = 1
Query:  187 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 816
            S++ L + E    LF+S   K +K Y   +E  YRF +FK NL+        + +   G+  F+D++  EF+ ++ G         +     +L   D  +P   DWR  GAVT VK+QG+CGSCW+FSA   +EG   + TG L   SEQ+L+DCD             GCNGG   SA + + +  G+     YPY G        +K   AA
Sbjct:   34 SQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAA 238          
The following BLAST results are available for this feature:
BLAST of FC877805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
TEST2_RAT6.215e-2634.65Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
TEST2_MOUSE8.116e-2634.93Testin-2 OS=Mus musculus PE=2 SV=1[more]
PAPA2_CARPA1.060e-2531.12Chymopapain OS=Carica papaya PE=1 SV=2[more]
ERVB_TABDI1.060e-2540.00Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATW_MOUSE1.808e-2531.62Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATQ_RAT1.808e-2531.56Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATL1_PARTE3.084e-2535.48Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATR_MOUSE4.028e-2532.78Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATW_FELCA8.974e-2531.93Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
PAPA1_CARPA1.531e-2433.49Papain OS=Carica papaya PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877805 ID=FC877805; Name=FC877805; organism=Citrus clementina; type=EST; length=893bp
TCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTG
AAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCC
TCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCT
ATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCT
CCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGA
CTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCT
AACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCA
CGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGT
TCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCT
CCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGC
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