FC877805

Overview
NameFC877805
Unique NameFC877805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14
Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 792
            F  +K  F+K+YAT E+ +   + F  +++  +            +   SDL+  EF+ +FL        L  +  L A+     I    + P + D R    VT ++ QG CGSCW+FS   A E A+     + + L+EQ+LVDC          +   GC+G  +    EYI +  GV +E  Y Y   +  SC+
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNG-------GAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSI--NGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEYI-QHNGVVQESYYRYVARE-QSCR 202          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14
Identity = 64/246 (26.02%), Postives = 109/246 (44.31%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---------------------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            F  F +K+ ++Y    E   +++ FK N  + K+    +      V +FSD +  +F   F  L   + +P   +K  ++P +                     D+P   D+R+ G V   KDQG CGSCW+F++ G +E  +     + +++LSEQ++VDC            + GC+GG    +F Y ++  G+    DY Y   D   C   + K    +S+   +  +E   A N V  GP+
Sbjct:  237 FFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKL---VPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEV--GPV 467          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13
Identity = 49/158 (31.01%), Postives = 68/158 (43.04%), Query Frame = 1
Query:  430 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG----ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            P     AP  P        DW  +   T ++DQG CGSCW+F+++ ALE  + +  G      + LS Q  V+C             SGCNGG   + F +  K  G+  EKD PY    G SC    S      +N+      +  + A L K GP+
Sbjct:  226 PKPTTPAPTTPAPTSTLTVDWTSYQ--TPIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNC-----------IASGCNGGWSGNYFNF-FKTPGIAYEKDDPYKAVTGTSCITTSSVARFKYTNYGYTEKTKAALLAEL-KKGPV 368          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 58/192 (30.21%), Postives = 92/192 (47.92%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR-QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 792
            F  +  K +K Y T+ E  YR  ++ +N R  +   Q  D T   G  +F  L+  EF   +L  +    +       P +    L    DWR++   T VK+QG C S W+FS + +LE  + +   + ++ S QQ+VDCD+          ++GC+GG    A EY+L+ G V    +YPY   +  +CK
Sbjct:   29 FERWALKNNKFY-TESEKLYRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYLQKSDS-SVNIMGASLPEVQLEGLGA-VDWRNY---TTVKEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRVGLVS-STNYPYVAKN-QTCK 203          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11
Identity = 56/189 (29.63%), Postives = 84/189 (44.44%), Query Frame = 1
Query:  361 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRD-HGA--VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS--LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPL 891
            ++  LT  E  R+  G +RR+  P  A     +      LPT +DWR+ HG   VT V++QG+CGSC+SF++ G +E    + T    +  LS Q++V C              GC GG          +  G+  E  +PYTGTD   C+  +       S +  +       +E  M   LV  GP+
Sbjct:  192 EYETLTLKEMIRRGGGHSRRIPRPKPAPITAEIQKKILHLPTSWDWRNVHGINFVTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEDCFPYTGTD-SPCRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPM 370          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 55/189 (29.10%), Postives = 83/189 (43.92%), Query Frame = 1
Query:  361 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRD-HGA--VTGVKDQGACGSCWSFSATGALEG--AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-----DEDQMAANLVKHGPL 891
            ++  LT  +  R+  G +R++  P  A     +      LPT +DWR+ HG   V+ V++Q +CGSC+SF++ G LE       S  +   LS Q++V C              GC GG          +  G+  E  +PYTGTD   CK  +       S +  +       +E  M   LV HGP+
Sbjct:  192 EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKVLHLPTSWDWRNIHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTD-SPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPM 370          
The following BLAST results are available for this feature:
BLAST of FC877805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PEPT1_DERPT1.436e-1428.79Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CYSP_PLAVS1.436e-1426.02Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
GMSA_DICDI6.033e-1331.01Gamete and mating-type specific protein A OS=Dicty... [more]
CATL3_PARTE3.911e-1230.21Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATC_BOVIN7.375e-1129.63Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_PONAB9.632e-1129.10Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877805 ID=FC877805; Name=FC877805; organism=Citrus clementina; type=EST; length=893bp
TCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTG
AAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCC
TCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCT
ATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCT
CCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGA
CTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCT
AACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCA
CGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGT
TCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCT
CCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGC
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