FC877805

Overview
NameFC877805
Unique NameFC877805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35
Identity = 94/249 (37.75%), Postives = 133/249 (53.41%), Query Frame = 1
Query:  196 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK---RRQLLD---------PTAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPL 891
            +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +     R  LL+          +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GCNGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++   +   GP+
Sbjct:   49 NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPV 286          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 86/218 (39.45%), Postives = 121/218 (55.50%), Query Frame = 1
Query:  259 TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG--ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGP 888
            + EE + RF +FKAN+             V G+  F+D+T  E+R  +LG       P DA    + P+  +         DWR  GAVT +K+QG CG CWSFSATGA EGA +++ G  +L S+SEQQL+DC        SGS  ++GC GGLM  AFEYI+  GG++ E  YP+T  +   CK++ S I A +S++  ++S  +   A  V  GP
Sbjct:   42 SSEEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGT------PFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDC--------SGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFT-ANTEKCKYNPSNIGAELSSYVNVTSGSESDLAAKVTQGP 244          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35
Identity = 90/233 (38.63%), Postives = 122/233 (52.36%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGVEREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPL 891
            F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  ++L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G +EG  +L+  ELVSLSEQQLV CD           + GC+GGLM  AF+++L+   G +  E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+
Sbjct:   38 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD---------DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPI 261          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35
Identity = 89/237 (37.55%), Postives = 125/237 (52.74%), Query Frame = 1
Query:  193 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    +  F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+YI + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP+
Sbjct:   22 DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPI 245          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 90/234 (38.46%), Postives = 123/234 (52.56%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGVEREKDYPYTGTDG----GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  ++L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G +EG  +L+  ELVSLSEQQLV CD           + GC+GGLM  AF+++L+   G +  E  YPY   +G     S   ++  + A +    +I S E  MAA L K+GP+
Sbjct:   38 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD---------DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPI 262          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 80/213 (37.56%), Postives = 122/213 (57.28%), Query Frame = 1
Query:  199 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 822
            LL A ++F  F  KF+K Y+++ E  +RF++F+ NL     +   D TA + + KFSDL+  E   ++ GL+    LP   Q   +  IL  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +    L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GGV+ E DYPY  T  G C+ + ++    V
Sbjct:   21 LLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQCRINPNRFVVGV 219          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 87/239 (36.40%), Postives = 134/239 (56.07%), Query Frame = 1
Query:  196 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPL 891
            +L  A  +F  F   ++K Y +  E + R+ +FK NL    AK     D PTA + + KFSDL+ SE   +F GL+   R+ ++  K  IL  P +  P  FDWR+   VT +K+QGACG+CW+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+
Sbjct:   48 NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERV-SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPI 275          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 79/233 (33.91%), Postives = 132/233 (56.65%), Query Frame = 1
Query:  199 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPL 891
            +L A ++F  F  KF+K+Y+++ E   RF++F+ NL     +   D TA + + KF+DL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE ++  GG++ E DYPY   + G C+ + +K    V   +  I+  E+++   L   GP+
Sbjct:   21 VLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYE-ANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPI 243          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.324e-35
Identity = 87/214 (40.65%), Postives = 113/214 (52.80%), Query Frame = 1
Query:  229 FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS-CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 855
            FK KF + Y   EE  YR  VF  NL+      K+ +  + T    + +FSD+T  +F     G  +  R  A        P +   T+ DWR  GAVT VKDQG CGSCW+FS TG +EG HFL TG LVSLSEQQLVDC         GS  + GCNGG +  A  Y+   GGV+ E  YPY   D  +C+F+ + I A  + +  I+   +
Sbjct:   23 FKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTSTDAAPES---TEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC-------AGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARD-NTCRFNSNTIGATCTGYVGIAQGSE 225          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.324e-35
Identity = 80/233 (34.33%), Postives = 130/233 (55.79%), Query Frame = 1
Query:  199 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPL 891
            LL A  +F  F   F+K Y+++ E  +RF++F+ NL     + L D +A + + KFSDL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E ++  GG++ E DYPY   + G C+ + +K    V   +  +   E+++   L   GPL
Sbjct:   21 LLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYE-ANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPL 243          
The following BLAST results are available for this feature:
BLAST of FC877805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATV_NPVHZ1.130e-3537.75Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP6_DICDI2.517e-3539.45Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
LMCPB_LEIME3.288e-3538.63Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CATL1_MOUSE3.288e-3537.55Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP2_LEIPI4.294e-3538.46Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVOP4.294e-3537.56Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVLD5.608e-3536.40Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVCF5.608e-3533.91Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CYSP1_HOMAM7.324e-3540.65Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATV_NPVCD7.324e-3534.33Viral cathepsin OS=Choristoneura fumiferana defect... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877805 ID=FC877805; Name=FC877805; organism=Citrus clementina; type=EST; length=893bp
TCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTG
AAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCC
TCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCT
ATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCT
CCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGA
CTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCT
AACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCA
CGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGT
TCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCT
CCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGC
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