FC877805

Overview
NameFC877805
Unique NameFC877805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34
Identity = 82/216 (37.96%), Postives = 118/216 (54.63%), Query Frame = 1
Query:  268 EHDYRFRVFKANLR-------RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPL 891
            EH+ RF VF  NL+       RA  R         G+ +F+DLT  EFR  FLG     R  A  ++       +LP   DWR+ GAV  VK+QG CGSCW+FSA   +E  + L TGE+++LSEQ+LV+C        +   +SGCNGGLM+ AF++I+K GG++ E DYPY   D G C  ++      ++  F  +  ++++     V H P+
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRL----GMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVD-GKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPV 273          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34
Identity = 86/237 (36.29%), Postives = 133/237 (56.12%), Query Frame = 1
Query:  199 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPL 891
            LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+
Sbjct:   21 LLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPI 242          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.381e-33
Identity = 86/237 (36.29%), Postives = 122/237 (51.48%), Query Frame = 1
Query:  193 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            D  LNA+ +   +K+   + Y   EE  +R  V++ N++  +          HG T     F D+T  EFR+   G   +        + P+    ++P   DWR+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF Y+   GG++ E+ YPY G D  +C +     AA  + F  +   E  +   +   GP+
Sbjct:   22 DQSLNAQWY--QWKATHRRLYGMNEE-GWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFA--EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPI 246          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.804e-33
Identity = 85/221 (38.46%), Postives = 126/221 (57.01%), Query Frame = 1
Query:  247 KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLNRRLRLPAD-AQKAPILPTNDLPTDFDWRDHGAVTG-VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPL 891
            K Y    E + RF++FK NL+R +     DP   +  G+ KFSDLT  EF+  +LG     +  +D A++      + LP + DWR+ GAV   VK QG CGSCW+F+ATGA+EG + ++TGELVSLSEQ+L+DCD        G+ + GC GG    AFE+I + GG+  ++ Y YTG D  +CK  + K      ++   V+  +++      V + P+
Sbjct:   50 KNYNGLGEKERRFKIFKDNLKRIEEHNS-DPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDR-------GNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPI 262          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33
Identity = 83/223 (37.22%), Postives = 120/223 (53.81%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVK 879
            F+ F  ++ K+Y +  E   RFR+F  +L+  +       +   G+ +F+D++  EFR   LG  +                  LP   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPY G + G CKF    +   V    N ++ + DE + A  LV+
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR 273          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 4.019e-33
Identity = 80/220 (36.36%), Postives = 119/220 (54.09%), Query Frame = 1
Query:  244 SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            +K Y T +E   R+  FK N+             V G+ + +DL+  E+R  +LG    ++L    ++   L  N      P + DWR+  AVT VKDQG CGSC+SFS TG++EG   + TG+LVSLSEQ ++DC        S   + GCNGGLM +AFEYI+K  G+  E+ YPY       CKF +  +AA ++++  I + ++    N +   P+
Sbjct:   42 NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDC-------SSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPV 253          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.249e-33
Identity = 85/216 (39.35%), Postives = 116/216 (53.70%), Query Frame = 1
Query:  268 EHDYRFRVFKANLR-------RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTG-VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            EH+ RFRVF  NL+       RA  R         G+ +F+DLT  EFR  +LG     R     +         LP   DWRD GAV   VK+QG CGSCW+FSA  A+EG + + TGELVSLSEQ+LV+C            +SGCNGG+M+ AF +I + GG++ E+DYPYT  DG      +S+   ++  F  +  +++      V H P+
Sbjct:   84 EHERRFRVFWDNLKFVDAHNARADERGGFRL----GMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVEC-------ARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPV 288          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.249e-33
Identity = 76/199 (38.19%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  205 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT-------NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 780
            NA+  F+ F  K++K Y   +E + RF +FK NL     R  L+ +A+  +   +D++ +E  ++  GL   L +  + + +   PT         +P  FDWRD  +VT VK Q  CGSCW+FSA   +E  + +     + LSEQQLVDCD           ++GCNGGLM+ AFE I++AGG+  E  YPYTG DG
Sbjct:   38 NAQELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSL-MRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDG 226          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.855e-33
Identity = 80/238 (33.61%), Postives = 127/238 (53.36%), Query Frame = 1
Query:  205 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--------NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPL 891
            +A  +F  F S+++K Y++++E  YR+ +F+ N+     +   + +AV+ + +F+D+T +E       +NR   L +    A    T           P +FDWR++  VT VKDQG CG+CW+F+  GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I+  GGVE+E DYPY       C     K A  V N +  +   E+++   L   GP+
Sbjct:   35 SAPLYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEV------VNRHTGLASGDIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAV-RLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPI 256          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.855e-33
Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 1
Query:  205 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            N + H+  +K+   + Y   EE ++R  V++ N +             HG    +  F D+T  EFR+   G   +          P+L   D+P   DW   G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   G ++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP+
Sbjct:   24 NLDAHWHQWKATHRRLYGMNEE-EWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPI 246          
The following BLAST results are available for this feature:
BLAST of FC877805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ORYB_ORYSJ8.098e-3437.96Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATV_NPVRO8.098e-3436.29Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATL1_CANFA1.381e-3336.29Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CPR2_ARATH1.804e-3338.46Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP2_MAIZE3.077e-3337.22Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CYSP3_DICDI4.019e-3336.36Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP1_ORYSJ5.249e-3339.35Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATV_GVXN5.249e-3338.19Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATV_NPVMC6.855e-3333.61Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATL2_BOVIN6.855e-3336.91Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877805 ID=FC877805; Name=FC877805; organism=Citrus clementina; type=EST; length=893bp
TCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTG
AAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCC
TCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCT
ATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCT
CCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGA
CTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCT
AACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCA
CGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGT
TCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCT
CCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGC
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