FC877805

Overview
NameFC877805
Unique NameFC877805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 81/231 (35.06%), Postives = 123/231 (53.25%), Query Frame = 1
Query:  208 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPL 891
            A + F  +K++++K Y++Q+EHD RF  FKA  +        + +   G+  ++DL+  EF         R  +              +P+  DWR+   VT VKDQG CGSCW+F +TG+LEG + ++ GELVSLSEQQLVDC        +GS   GC GG  +SAF+Y+++ G +  E +YPY     G C+ D++   + VS     +V S  E  +   +   GP+
Sbjct:  221 ASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCR-DRTVTPSGVSITGYVNVTSGSESALQNAIATTGPV 442          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 72/176 (40.91%), Postives = 100/176 (56.82%), Query Frame = 1
Query:  364 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            F D+T  EFR+   G   +        +  +LP  ++PT  DWR+ G +T VKDQG CGSCW+FSATGALEG  F  TG+L+SL+EQ LVDC            + GCNGG M++ F Y+ + GG++ E  YPY G    +C+++    AA  + F  I S E  +A  +   GP+
Sbjct:   23 FGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLP--EIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDC-------SGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEG-KVKTCRYNPKYSAANDTGFVDIPSQEKDLAKAVATVGPI 188          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.867e-30
Identity = 87/226 (38.50%), Postives = 122/226 (53.98%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVK 879
            F+ F  +  K Y    E   RFR+F  +L   R   RR L  P  + G+ +F+D++  EF+   LG  +       A    +     LP   DWR+ G V+ VKDQG CGSCW+FS TG+LE A+  +TG+ VSLSEQQLVDC        +   + GC+GGL + AFEYI   GG++ E+ YPYTG + G C +    +   V    N ++ + DE + A  LV+
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGL--PYRL-GINRFADMSWEEFQASRLGAAQNCSATL-AGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDC-------ATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN-GICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVR 275          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.867e-30
Identity = 85/228 (37.28%), Postives = 123/228 (53.95%), Query Frame = 1
Query:  217 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPL 891
            HF  +  +  K Y+ +E H +R +VF +N R+       + T   G+ +FSD++  E R ++L    +      A K   L  T   P   DWR  G  V+ VK+QG+CGSCW+FS TGALE A  ++TG+++SL+EQQLVDC    +       + GC GGL + AFEYI    G+  E  YPY G D   CKF   K  A V + + I+ +DE+ M   +  + P+
Sbjct:   34 HFKSWMVQHQKKYSLEEYH-HRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQ---NCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQD-DHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPV 249          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.184e-30
Identity = 82/198 (41.41%), Postives = 108/198 (54.55%), Query Frame = 1
Query:  268 EHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP-----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 840
            E   RF  FK+N     +  ++   P  +H + +F D+  +EFR  F+G  RR   PA     P      L  +DLP   DWR  GAVTGVKDQG CGSCW+FS   ++EG + + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEYI   GG+  E  YPY     G+C      +A A  N  V+
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRR-DTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA-RGTC-----NVARAAQNSPVV 242          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.432e-30
Identity = 64/194 (32.99%), Postives = 109/194 (56.19%), Query Frame = 1
Query:  199 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 777
            LL A  +F  F + ++K Y    E + RF +F+  L     +  L+ +AV+ + KF+DL+ +E   ++ GLN  ++     +   I  P    P +FDWR    VT +K+Q ACG+CW+F+   ++E  + +     + LSEQQ++DCD+          D GC+GGL+++AFE +++ G + +E +YPY G +
Sbjct:   24 LLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVN 208          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.094e-30
Identity = 81/198 (40.91%), Postives = 108/198 (54.55%), Query Frame = 1
Query:  268 EHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP-----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 840
            E   RF  FK+N     +  ++   P  +H + +F D+  +EFR  F+G  RR   P+     P      L  +DLP   DWR  GAVTGVKDQG CGSCW+FS   ++EG + + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEYI   GG+  E  YPY     G+C      +A A  N  V+
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRR-DTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA-RGTC-----NVARAAQNSPVV 242          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.265e-30
Identity = 78/214 (36.45%), Postives = 109/214 (50.93%), Query Frame = 1
Query:  268 EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-RRLRL----PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPL 891
            E   RF VFK N         +D      + KF+D+T  EFR  + G   +  R+    P           + +P   DWR  GAVT VKDQG CGSCW+FS   A+EG + + T +LVSLSEQ+LVDCD +         + GCNGGLM+ AFE+I + GG+  E +YPY   D G+C   K    A ++     +  +++      V + P+
Sbjct:   53 EKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPV 257          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29
Identity = 77/233 (33.05%), Postives = 121/233 (51.93%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR------LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            F  +  K  K Y +  E + R  +F+ NLR    R   + +   G+T F+DL+  E++    G + R          +D  K      + LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+K GG+  + DYPY   +G   G  K +   +   +  +  + ++++      V H P+
Sbjct:   49 FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSA--DDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNV--MIDGYENLPANDESALMKAVAHQPV 268          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29
Identity = 82/223 (36.77%), Postives = 116/223 (52.02%), Query Frame = 1
Query:  205 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQ 858
            N +  +  +K+   + Y   EE  +R  V++ N++  +          HG T     F D+T  EFR Q +G  R  +       + P+    DLP   DWR  G VT VK+Q  CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGG M  AF+Y+ + GG++ E+ YPY   D   CK+      A  + F+V++  +++
Sbjct:   24 NLDTKWYQWKATHRRLYGANEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFL--DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVD-EICKYRPENSVANDTGFTVVAPGKEK 234          
The following BLAST results are available for this feature:
BLAST of FC877805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CFAD_DICDI8.380e-3135.06Counting factor associated protein D OS=Dictyostel... [more]
CATL6_HUMAN8.380e-3140.91Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
ORYC_ORYSJ1.867e-3038.50Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATH_PIG1.867e-3037.28Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CYSP1_HORVU3.184e-3041.41Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATV_NPVBS5.432e-3032.99Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CYSP2_HORVU7.094e-3040.91Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSEP_RICCO9.265e-3036.45Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CPR3_ARATH1.580e-2933.05Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATL2_HUMAN1.580e-2936.77Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877805 ID=FC877805; Name=FC877805; organism=Citrus clementina; type=EST; length=893bp
TCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTG
AAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCC
TCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCT
ATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCT
CCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGA
CTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCT
AACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCA
CGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGT
TCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCT
CCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGC
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