FC877813

Overview
NameFC877813
Unique NameFC877813
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14
Identity = 64/201 (31.84%), Postives = 97/201 (48.26%), Query Frame = 1
Query:  229 PGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSS--AFADRPVKESAYELLFHRA-IGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFR-ETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            P P  LPI+G  L   G+L HR L  LA      PL+   +G    +I S  + A+EIL +    FA RP   +A  + +    + F+P+GEYWR +R+I    L S KR++     R E VGL M++ I        AV + ++L   S  ++    FG+ YE        +++  ++   L  E   L+G F   D+FP
Sbjct:   33 PSPPNLPIIGN-LHQLGNLPHRSLRSLANELG--PLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGL-MMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYE-------GEEERKNKFADLATELTTLMGAFFVGDYFP 222          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 61/217 (28.11%), Postives = 105/217 (48.39%), Query Frame = 1
Query:  187 LYKSRFSTQT--RTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEIL--NSSAFADRPVKESAYELLF-HRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLM-EKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            L+K  F+T    +   P P  LPI+G  L   G   HR L KL+  +   P+M   +G    +++S  +  ++I+  N   +++RP  + A  L++  + + F+P GEYWR +R I+  HL S KR+      RE     M+++++ +    + A ++R +  + + N +     G+ Y         + D    L+  V    ELLGTFN  D+ P
Sbjct:   11 LHKCFFTTSNNNKKLPPSPRKLPIIGN-LHQLGLHPHRSLHKLSKKYG--PVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYN-------DEIDAKATLDKFV----ELLGTFNVGDYIP 213          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.392e-13
Identity = 65/233 (27.90%), Postives = 112/233 (48.07%), Query Frame = 1
Query:  130 FIFVSIFCFFLAPGGLAWALYKSRFSTQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSSAF--ADRPVKESAYELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            F+ + +  FFL        ++  +     +   PGP+ LPI+G +    G L H+ L  L  S +  P+M   +GF   V+ S  + A+E L +       RP+  ++     + + IGF  +G+ WR LR++S    FS K++      RE     M+K+++ L  K   V++ K+L   + + +  + FG+S+ F  K   H D  S  ++ L+ E    + TF +SD FP
Sbjct:    8 FLLLLVPIFFLL-------IFTKKIKESKQNLPPGPAKLPIIGNLHQLQG-LLHKCLHDL--SKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSF-FDNK---HVDQES--IKELMFESLSNM-TFRFSDFFP 223          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.818e-13
Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  229 PGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEIL--NSSAFADRPVKESAYELLFHRA-IGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            PGP G PI+G +L     LTHR LA LA  +    L    +GF      S P+ A+++L    S F++RP   +   L + RA + FA +G +WR +R++    +FS KR       R+ V  KMV+ +        +  V K ++ G     +         FG  C    + G  E   +++E  +L G FN +D  P
Sbjct:   42 PGPRGWPIIGNML-MMDQLTHRGLANLAKKYGG--LCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRDEVD-KMVRSV--------SCNVGKPINVGEQIFALTRNITYRAAFGSAC----EKGQDEFIRILQEFSKLFGAFNVADFIP 225          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.374e-13
Identity = 70/240 (29.17%), Postives = 110/240 (45.83%), Query Frame = 1
Query:  109 STAGSLPFIFVSIFCFFLAPGGLAWALYKSRFSTQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSSAF--ADRPVKESAYELLFHRA-IGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            +T   LP +F+S  C  LA    A  L K R   Q +   P P G PI+G  L   G L H+ L  L+  +   P+M    G    V+ S  +TAK+ L         RP       L ++   I F+PF +YW+ LRR+    LFSPK++ ++   RE    K++        +   V + + L   ++  +  + FG S++ G   N      S   + L+ + +  LG+F+ SD+FP
Sbjct:    2 ATIWFLPLLFLS--CLLLA----ALRLKKRR---QHQRKPPSPPGFPIIGN-LHQLGELPHQSLWSLSKKYG--PVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFGVSFQ-GTVLN------SDNFDKLIHDAFLFLGSFSASDYFP 222          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 66/234 (28.21%), Postives = 109/234 (46.58%), Query Frame = 1
Query:  136 FVSIFCFFLAPGGLAWALYK--SRFSTQTRTAIPGPSGLPILGMVLAFTGS-LTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSS--AFADRPVKESAYELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            F SIF  F+      +  +K  ++ S  T +  PGP  LPI+G +    GS L H  L  L+  + +  LM   +G    ++ S P+ AKE++ +    FA RP   +A  + +  + + F P+G+YWR LR+I    L S KR+      RE V    +K +  +  +   V V K      + S + ++  R+   G K  +H      +L  +V E  ++ G F+  D +P
Sbjct:    8 FTSIFSIFI----FMFMTHKIVTKKSNSTPSLPPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGS--LMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATI--EGSQVNVTK-----EVISTVFTITART-ALGSKSRHH-----QKLISVVTEAAKISGGFDLGDLYP 222          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.050e-13
Identity = 59/201 (29.35%), Postives = 98/201 (48.76%), Query Frame = 1
Query:  229 PGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEIL--NSSAFADRPVKESAYELLF-HRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFR-ETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            PGP+  PI+G  L   G+  HR L+ +  ++   P++   +GF   V+++    A++ L  + + FA RP    A  + + ++ + FAP+G  WR LR+IS  HLFS K +      R E VG    + +RV       V + ++++   +N++   + GR   FG   ++  D    E   +V E   L G FN  D  P
Sbjct:   35 PGPNPWPIIGN-LPHMGTKPHRTLSAMVTTYG--PILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTRELVRV---GTKPVNLGQLVNMCVVNALGREMIGRRL-FGADADHKAD----EFRSMVTEMMALAGVFNIGDFVP 224          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.289e-13
Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = 1
Query:  145 IFCFFLAPGGLAWALYKSRFSTQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSS--AFADRPVKESAYELLFH--RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEI 606
            +FCF L+     +    S++S       PGP  +PILG     +G  TH +L  LA  +   PLM   +G    +++S P  A+EI  +    FADRP    +++++ +    +  +P+G YWR LR+IS   L S K +      RE   L  +K I
Sbjct:    2 LFCFILSKTTKKFG-QNSQYSNHDELP-PGPPQIPILGNAHQLSGGHTHHILRDLAKKYG--PLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI 155          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 58/200 (29.00%), Postives = 96/200 (48.00%), Query Frame = 1
Query:  229 PGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSSAF--ADRPVKESAYELLFHRA-IGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            P P G PI+G  L   G L H+ L KL+  +   P+M   +G    VI S  +TAK+ L         RP    A EL ++   I F+P+ +YW+ +R+++   LFS K++  +   ++    K++  I     +   + + K L   +++ V  + F  ++E G   N      S     +VRE  E+LG+F+ SD  P
Sbjct:   33 PSPPGCPIIGN-LHQLGELPHQSLWKLSKKYG--PVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNFE-GTVLN------SERFNNIVREALEMLGSFSASDFIP 222          
BLAST of FC877813 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 61/219 (27.85%), Postives = 102/219 (46.58%), Query Frame = 1
Query:  187 LYKSRFSTQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSS--AFADRPVKESAYELLFHRA-IGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEK-----NGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFP 819
            +++ +   + R  +P P GLP++G  L   G   HR L  L  S R  PLM    G    ++ S  + A+++L +    FA RP  +   +LL+ +  +  AP+GEYWR ++ +   HLFS K +    + RE       +EI ++MEK     +  V + K+L   + + +     GR Y            G  + + L+    +LLGTF+   + P
Sbjct:   19 IFRKQKRGKKRNTLPSPPGLPLIGN-LHQLGRHPHRSLCSL--SHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVRE-------EEISLMMEKIRKSISLPVNLSKILVSLTNDVICKVALGRKY-----------GGETDFKELMERLNKLLGTFSVGSYVP 216          
The following BLAST results are available for this feature:
BLAST of FC877813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
C71A1_PERAE6.248e-1431.84Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A3_SOLME1.066e-1328.11Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71B4_ARATH1.392e-1327.90Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH1.818e-1330.00Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH2.374e-1329.17Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN3.101e-1328.21Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
F3PH_ARATH4.050e-1329.35Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71DC_CATRO5.289e-1331.65Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BV_ARATH9.021e-1329.00Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.178e-1227.85Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877813 ID=FC877813; Name=FC877813; organism=Citrus clementina; type=EST; length=819bp
CAATATCATAAATACCCCTCAGAAAATCACTTATTTGTCTTTAAAAATCA
TCTTTTTTAATCTTAAGCAAACATGACTGCTGATCAGTATTTTCTTCCCT
TTGTTTTTTCAACAGCTGGTTCCTTACCATTTATCTTTGTCTCAATTTTC
TGTTTCTTCTTGGCACCCGGTGGCTTGGCTTGGGCTCTTTACAAAAGCCG
GTTCAGTACCCAAACCCGAACGGCCATTCCCGGTCCCTCCGGTCTCCCCA
TTCTTGGCATGGTTCTAGCTTTCACCGGCTCTCTGACTCATAGAGTCCTT
GCCAAGCTGGCTGTGTCTTTCCGGGCCAAGCCATTGATGGCTTTCTCCGT
TGGGTTCACTCGTTTCGTCATATCAAGCCACCCCGATACAGCCAAAGAGA
TTCTTAACAGCTCAGCTTTCGCTGATCGCCCCGTTAAGGAATCGGCTTAT
GAACTTTTGTTTCATAGGGCAATTGGGTTTGCTCCCTTTGGCGAGTACTG
GAGGAACCTGAGGAGAATCTCAGGTACGCATTTGTTTAGTCCCAAGAGAA
TGAGTGTTCTTGGGAAATTTCGCGAGACTGTTGGGCTAAAAATGGTGAAA
GAAATTAGGGTTTTGATGGAGAAAAACGGAGCCGTTGAAGTGAGAAAAGT
GTTGCATTTTGGGTCACTGAACAGTGTGATGATGAGTGTGTTTGGAAGGA
GTTATGAGTTTGGTGAAAAGTGCAATTATCATGATGATGATGGGAGTCAT
GAACTTGAGGGTTTGGTGAGGGAAGGGTATGAGTTGCTTGGGACCTTTAA
CTGGAGTGACCATTTTCCT
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