FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.995e-32
Identity = 81/243 (33.33%), Postives = 139/243 (57.20%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTL-QTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYK-RMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDGEAEAEADTDMVDELM 886
            +A+   L  + L  L +KYG L+HLQ+G I  + VS+P MA E+++  D+ F  RP  +A  ++ Y   D+AFA YG +WRQ+RKIC ++L S +R +S++ +R++ +  L Q++ ++ GS +++   +F+L      RAAFG   +D QDEF+ ++++   + G F + D FP +  ++     K ++    +  D  ++ I+ +HM        R +EG    N  EAE E   D+VD L+
Sbjct:   49 LALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKLFSLLGTTVSRAAFGK-ENDDQDEFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHM----EKRTRVKEG----NGSEAEQE---DLVDVLL 279          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.899e-32
Identity = 76/237 (32.07%), Postives = 140/237 (59.07%), Query Frame = 2
Query:  185 THRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANV-AITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYK-RMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDGEAEAEADTDMVDELM 886
            TH  L DLAKKYG L+HL++G +  +  S+P +A+E+ +  D++FA+RP+N+ +   ++YD +DM  + YG +WRQ+RKI +++L S++  +S+ S+R EEV + ++++ +  G+++N+ + +  L   IT RAAFG   +   +EF+++L + +K     NIAD FP + ++      K ++ +  +  D  +++I+  H            + KIN    +   E   D+VD L+
Sbjct:   47 THHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFGE-KNKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQLISTSKYKIEKIHKQFDVIVETILKGH------------KEKINKPLSQENGEKKEDLVDVLL 270          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.293e-31
Identity = 71/244 (29.10%), Postives = 134/244 (54.92%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDGEAEAEADTDMVDELM 886
            N+  + +  HR L  L+ +YG L+ L+ G + V+ VS+ D+A+++L+  D VFA+RP +     + Y+  D+A A YG +WRQM+ +CV+ L + +   S+ +VR EE+   ++ +  ++  +VN+ EL+ +LT ++  R A G   +  + +F ++++  +KL G F +  + PW+ WI+   G   ++ +    LD F++ ++ +H                   DG+A+    TD VD L+
Sbjct:   44 NLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVNLSELLGSLTNDVISRVALGR-KYSDETDFKELMKRLTKLLGEFCVGTYVPWLAWIDWISGLDGQLKKTGNDLDEFLEKVVQDH------------------EDGDAQR---TDFVDVLL 265          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.205e-31
Identity = 76/229 (33.19%), Postives = 129/229 (56.33%), Query Frame = 2
Query:  182 LTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEV-DSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWI-NARGFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDGEAEAEAD 862
            L H  L DL+ KYG L+HL++G +  + VS+P+ AKEV++  D +FA+RP  +A   + YD   +AF  YG +WRQ+RKI  ++L S +R +S+  +REEV  S ++ +    GS+VN+ + V +    IT R A GS S   Q + + ++ E +K+ G F++ D +P + ++ +  G   ++ +  +  D  + +II+EH         R+ +     + GE E   D
Sbjct:   56 LPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNVTKEVISTVFTITARTALGSKSRHHQ-KLISVVTEAAKISGGFDLGDLYPSVKFLQHMSGLKPKLEKLHQQADQIMQNIINEH---------REAKSSATGDQGEEEVLLD 274          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.913e-31
Identity = 76/212 (35.85%), Postives = 116/212 (54.72%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK-VNIGEL-----VFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            N+  M    HR L+ +   YG +LHL++G + VV  ++  +A++ L+  D  FA+RP N    ++ Y+  D+ FA YG  WR +RKI  + LFS +  E +  VR+E   TL   +   G+K VN+G+L     V AL R +  R  FG+ +    DEF  ++ E   L G FNI DF P + W++ +G   +M R  +  D F+ SI+ EH
Sbjct:   45 NLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGADADHKADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAGKMKRLHKRFDAFLSSILKEH 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.438e-30
Identity = 70/212 (33.02%), Postives = 117/212 (55.19%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTV--MNTTGSKVNIGELVFALTRNITYRAAFGS--FSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H  LA +AKKYG +++L++G   +   STPD AK  L+  D+ F+NRP N   T+L Y+  DM FA+YGP W+ +RK+  + +   +  E+WA+VR  E+   L+++  M+  G +V + E++     N+  +       F   G +  EF  ++ E   + G FNI DF P + W++ +G  KRM R  +  D  +  + DEH
Sbjct:   46 LPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMSDMSREGQRVVVAEMLTFAMANMIGQVMLSKRVFVDKGVEVNEFKDMVVELMTIAGYFNIGDFIPCLAWMDLQGIEKRMKRLHKKFDALLTKMFDEH 257          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.438e-30
Identity = 77/240 (32.08%), Postives = 126/240 (52.50%), Query Frame = 2
Query:  188 HRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREE-----VDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDGEAEAEADTDMVDELMAF 892
            H  L +LA KYG L+HL++G +  + V++P+MA+E+++  DL F++RP  V    ++Y+ + + F+ +G +WRQ+RKIC ++L + +R +S+ S+REE     V     T     GS  N+ + ++++T  I  RAAFG  S   Q  F+  + +   L G F++AD +P        G   ++ +     D  +  IIDEH                N N    E EA  D+VD L+ F
Sbjct:   66 HYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFGKKSR-YQQVFISNMHKQLMLLGGFSVADLYPSSRVFQMMGATGKLEKVHRVTDRVLQDIIDEHK---------------NRNRSSEEREAVEDLVDVLLKF 289          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.432e-30
Identity = 71/213 (33.33%), Postives = 121/213 (56.81%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTL--QTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFV---KILQEFSKLFGAFNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  +    HR L  L++KYG ++ L +G+  V+  S+ D A+++L+  D V+A RP       L Y   D+ F+ +G +W Q+R I V+ L S +R +S+  VREE  + +  +       S +N+GE +  LT NIT R A G  ++D ++  +    IL++F +L   FN+ D+ PW+ W+N   G   ++ +  + LD F+DS+I+EH+
Sbjct:   48 NLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVINLGEHLCFLTNNITSRVALGR-TYDERESGIDAKDILEQFLQLLDTFNVGDYIPWLKWVNKITGLDTKVEKIAKKLDTFLDSVIEEHI 259          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.094e-30
Identity = 71/212 (33.49%), Postives = 116/212 (54.72%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTV--MNTTGSKVNIGELVFALTRNITYRAAFGS--FSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H  LA +AKKYG +++L++G   +V  STPD AK  L+  DL F+NRP N   T+L Y   DM FA+YGP W+ +RK+  + +   +  E+WA+VR  E+   L+++  M+  G +V + E++     N+  +       F + G +  EF  ++ E     G FNI DF P + W++ +G  K M R  +  D  +  + DEH
Sbjct:   46 LPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDMSREGERVVVAEMLTFAMANMIGQVILSKRVFVNKGVEVNEFKDMVVELMTTAGYFNIGDFIPCLAWMDLQGIEKGMKRLHKKFDALLTKMFDEH 257          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.265e-30
Identity = 74/220 (33.64%), Postives = 119/220 (54.09%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREE-----VDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAF-----GSFSHDGQ---DEFVKILQEFSKLFGAFNIADFFPWMGWINA-RGFYKRMARARESLDGFIDSIIDEH 778
            N+  +    HR L  L+++YG ++ L  G++ V+  S+P+ A+E+++ QDL F+NRP       L YD  D+AFA YG +WRQ+R ICV++L S +R +S+  VREE     V+  +Q    T  + VN+ +L+  LT ++  R A      G+ + DG+       K L EF  L G   + ++ PW+ W     G  +R+     + D F+  +I EH
Sbjct:   39 NLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVFCRIALGKKYGGTTTGDGEYHVRSLKKNLAEFYVLLGISPLWEYIPWLEWTRRFDGVDRRIEEVSRTFDEFLGKVIQEH 258          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C71D8_SOYBN1.995e-3233.33Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71DC_CATRO9.899e-3232.07Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71AM_ARATH1.293e-3129.10Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN2.205e-3133.19Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
F3PH_ARATH4.913e-3135.85Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A1_PETHY2.438e-3033.02Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71DA_SOYBN2.438e-3032.08Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71A4_SOLME5.432e-3033.33Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C75A3_PETHY7.094e-3033.49Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71A6_NEPRA9.265e-3033.64Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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