FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18
Identity = 63/211 (29.86%), Postives = 105/211 (49.76%), Query Frame = 2
Query:  185 THRGLADLAKKYG--GLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREE-----VDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQEFS-KLFGAFNIADFFP---WMGWINARGFYKRMARARESLDGFIDSIIDEHM 781
            TH  + DL  K+G  GLL L++GA+  + VS+P  A  VL+ QD +FA+RP  +A   + Y  +D+AF  YG + RQ RK+    + S ++ +S+   R+E     +D           + V++ +L+   T ++  RA  G S  + G++     L E +  L   FN+ D+FP    M  +  R    +  R  +  +   D +I EH+
Sbjct:   79 THISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRNQGRNRLFSELTEINVSLLAGFNLEDYFPPNMAMADVLLRLVSVKARRLNQRWNDVFDELIQEHV 289          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 72/247 (29.15%), Postives = 112/247 (45.34%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFS----RRREESWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQ----EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARES-LDGFIDSIIDEHMXXXXXXNVRDEEGKINYN---DGEAEAEADTDMV 874
            D L HR L  LAK++G +  L+MG  ++V VS+PD+AKEVL  Q + F +R  NV     T +  DM F  YG  WR+MR+I  +  F+    ++    W +    V   ++   +   S + I   +  +  N  YR  F       +D   + L+    E S+L  +F  N  DF P +     +G+ K     +E+ L  F D  +DE        +  +E  K   +   D E + E + D V
Sbjct:   51 DDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRFESEEDPLFQRLKALNGERSRLAQSFEYNYGDFIPILRPF-LKGYLKICKEVKETRLKLFKDYFVDERKNIGSTKSTNNEGLKCAIDHILDAEKKGEINEDNV 296          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 67/211 (31.75%), Postives = 99/211 (46.92%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFS----RRREESWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQ----EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARES-LDGFIDSIIDE 775
            D L HR L DLAKK+G +  L+MG  ++V VS+P++AKEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+    ++    W S    V   ++   +   S   I   +  +  N  YR  F       +D   + L+    E S+L  +F  N  DF P +     +G+ K     +E+ L  F D  +DE
Sbjct:   51 DDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFEYNYGDFIPILRPF-LKGYLKICKEVKETRLKLFKDYFVDE 260          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 59/217 (27.19%), Postives = 106/217 (48.85%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTG---SKVNIGELVFALTRNITYRAAFGSFSHDG----QDEFVKILQEFSKLFGAFNIADFFP--WMGWIN--ARGFYKRMARARESLDGFIDSIIDEH 778
            N+  + +L HR    LA++ G ++ L  G + V  +S+ + A+EVL+  DL    RP  V    ++    D++F  YG  WR+ RK  V +LF  ++ + +  + EE  + L   +  +      V++ + +F L  +I +R AFG   HD     +D+  +++ E      +F  +DFFP   +GW+     G ++ +      LD     +ID+H
Sbjct:   42 NLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFHDNKFIDEDKIDELIFETETAQASFTCSDFFPIAGLGWLADWISGKHRWLNNVFFKLDALFQRVIDDH 258          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.037e-17
Identity = 70/215 (32.56%), Postives = 102/215 (47.44%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRR--------REESWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQ---EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARE-SLDGFIDSIIDE 775
            D L HR L+D AKK+G +  L+MG  ++V VS+P++AKEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+ +         EE  A V E+V    ++  N    +  +  +++    N  YR  F   F  +    FVK+     E S+L   F  N  DF P +     RG+ +     +E  L  F D  +DE
Sbjct:   51 DDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMY----NNMYRIMFDRRFESEDDPLFVKLKALNGERSRLAQGFEYNYGDFIPILRPF-LRGYLRICKEVKERRLQLFKDYFVDE 260          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.175e-16
Identity = 61/248 (24.60%), Postives = 112/248 (45.16%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVM----NTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQD----------EFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDGEAEAEAD 862
            N+  + +  HR    L++KYG +  L  G+  VV VS+    ++     D+V ANRP  ++  Y+ Y+   +   +YG  WR +R+I  + + S  R  S++ +R +    L T +    +T  +++ +   ++ +T N   R   G   + G+D          +F  ++ E  +L GA N  DF P + +++     KR+       D F+  +I+EH       N   +   +N  D + E   D
Sbjct:   44 NLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGK-RYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLRFLDFENLEKRLKDISGKTDAFLRGLIEEHRTKKERANTMIDH-LLNLQDSQPEYYTD 289          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.175e-16
Identity = 63/258 (24.42%), Postives = 132/258 (51.16%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAF-ANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFA----LTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESL----DGFIDS-IIDEHMXXXXXXNVRDE---EGKINYNDGEAEAEADTDMVDELM 886
            N+ ++ +  H   ADL+K YG ++ L+ G+++ V V++P+ A+EVL+  D + ++R    +I  + +D+  + +       WR +RK+   +LFS +R E+  ++RE     L + M+ +  +   V+I    F     +  NI +    G++  +    F   +    +  G  + A+FFP++G+++ +G  K +    E L     GFID+ + ++ +      +VR+    +  ++  +G+ EAE +T+ +  L+
Sbjct:   50 NIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDLGNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFLDLQGNRKTLKACSERLFKVFRGFIDAKLAEKSLRDTNSKDVRERDFVDVLLDLTEGD-EAELNTNDIVHLL 306          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16
Identity = 66/211 (31.28%), Postives = 98/211 (46.45%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFS----RRREESWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQ---EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARES-LDGFIDSIIDE 775
            D L HR L DLAKK+G +  L+MG  ++V VS+P++AKEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+    ++    W +    V   ++         V I + +  +  N  +R  F   F  +    FVK+     E S+L  +F  N  DF P +     +G+ K     +E     F D  +DE
Sbjct:   51 DDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLFVKLKMLNGERSRLAQSFEYNYGDFIPILRPF-LKGYLKLCKEVKEKRFQLFKDYFVDE 260          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 66/211 (31.28%), Postives = 101/211 (47.87%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWA-SVREEVDSTLQTVMNTTGSKVN---IGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQ---EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARE-SLDGFIDSIIDE 775
            D L HR L DLAK++  +L L+M   ++V +S+P++AKEVL  Q + F +R  NV     T    D+ F  YG  WR+MR+I  +  F+ +  + +      E  S +  V   + + VN   I   +  +  NI YR  F   F  +    FVK+     E S+L  +F  N  DF P +     +G+ K     ++  L  F D  +DE
Sbjct:   51 DDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPF-LKGYLKVCKEVKDRRLQLFKDYFVDE 260          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16
Identity = 67/224 (29.91%), Postives = 111/224 (49.55%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVRE-EVDSTLQTVMNTTGSKVNIGE-------LVFALTRNITYRAAFGSFSHDGQD-------EFVKILQEFSKLFGAFNIADFFPWMGW---INARGFYKRMARARESLDGFIDSIIDEH 778
            N+  +  +  R  A+ A+ YG ++ +  G+   V VS  ++AKEVL+  D + A+R  + +    + D  D+ +A+YGP + ++RK+C ++LFS +R E+   +RE EV S + +V N   S  N+G+       L      NIT R AFG    + +        EF  I++   KL  +  +A+  PW+ W   +    F K  AR     D    +I+ EH
Sbjct:   40 NLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNIT-RLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLRWMFPLEEGAFAKHGARR----DRLTRAIMAEH 258          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C71C2_MAIZE8.135e-1829.86Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
TCMO_PHAAU1.812e-1729.15Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_SOYBN2.367e-1731.75Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C71BG_ARATH2.367e-1727.19Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
TCMO_CATRO4.037e-1732.56Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C81E1_GLYEC1.175e-1624.60Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C76C2_ARATH1.175e-1624.42Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ZINEL2.004e-1631.28Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PEA3.418e-1631.28Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C98A2_SOYBN3.418e-1629.91Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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