FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC877818_ssr781 microsatellite FC877818_ssr781:781..801. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig6012 contig Ccv1_Contig6012:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.295e-27
Identity = 67/202 (33.17%), Postives = 117/202 (57.92%), Query Frame = 2
Query:  179 QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYK-RMARARESLDGFIDSIIDEH 778
            +L    +AD+AKKYG + H+Q+G +  V +S+ +  KE ++  D   A+R  ++    + YD  D+ F+ Y   WRQMRKICV +L S R   S+  +R +E+   L+ + ++ G  V++ E +  LT +I  RAAFG+  +D  +E V+++++   +   F +AD FP    +N   + K ++ R R  +D  +++I+DEH
Sbjct:   53 KLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFGAIIND-HEELVELVKDSLSMASGFELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEH 253          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.295e-27
Identity = 63/212 (29.72%), Postives = 117/212 (55.19%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTT--GSKVNIGELVFALTRNITYRAAFGS--FSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H  LA +AKKYG +++L++G   +V  STP+ AK  L+  D+ F+NRP N   T++ Y+  DM FA YGP W+ +RK+  + +   +  E+WA+VR  E+   L+++ + +  G ++ + +++     N+  +       F   G++  EF  ++ E   + G FNI DF P + W++ +G  K M +  +  D  +  + +EH
Sbjct:   49 LPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFEEH 260          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.621e-27
Identity = 67/212 (31.60%), Postives = 115/212 (54.25%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVRE-EVDSTLQTVMNTT--GSKVNIGELVFALTRNITYRAAFGS--FSHDG--QDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H   A++AKKYG +++L++G+  +   STPD AK  L+  DL F+NRP N   T+L Y+  DM FA+YGP W+ +RK+  + +   +  E+WA VR+ E+   L+ +  ++     V I E++     N+  +       F+  G   +EF  ++ E     G FNI DF P +GW++ +G    M R  +  D  +  ++D+H
Sbjct:   54 LPLLGNMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSNEFKDMVVELMTSAGYFNIGDFIPSIGWMDLQGIEGGMKRLHKKFDVLLTRLLDDH 265          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.621e-27
Identity = 75/219 (34.25%), Postives = 122/219 (55.71%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVRE-EVDSTLQTVMNTTGSKVNI--GELVFALTRNITYRAAFGS------FSHDGQDEFVKILQEFSKLFGAFNIADFFP-WMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+ ++  L H+ L +LA++YG ++ L++G +  V VS+ + A+EVL+  D+   +RPA+     L+YD  ++ FA YG +WR+MRK+  ++L S RR ++    RE E+D  +  +     SK +I   + VFALT  I    AFG+      F+H  ++ F  +L +   +  +F+  DFFP   G +  R  GF  R  R    LD F + +ID+HM
Sbjct:   67 NLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFALTDGIIGTVAFGNIYASKQFAH--KERFQHVLDDAMDMMASFSAEDFFPNAAGRLADRLSGFLARRERIFNELDVFFEKVIDQHM 283          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.621e-27
Identity = 71/214 (33.18%), Postives = 124/214 (57.94%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVRE-EVDSTLQTVMNTT--GSKVNIGELVFALTRNITYRAAFG-SFSHD--GQDEFVKILQEFSKLFGAFNIADFFPWMGWIN--ARGFYKRMARARESLDGFIDSIIDEH 778
            N+  + +L H+ L  L+KKYG ++ L+ G+I  V VS+ + AK+VL+  DL   +RP+      L+Y+  D+AF+ +  +W+++R+ICV +LFS +R +S+  ++E EV   + +V  +   G+ VN+ E   +LT  +T +A FG +F       D F K++ +     G+F+ +D+FP  GWI     G + +  R+  +LD F + + D H
Sbjct:   43 NLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGTPVNLSEKFTSLTVRVTCKATFGVNFQGTVLNSDRFEKLIHDTYLFLGSFSASDYFPNGGWIIDWLTGLHGQRERSVRALDAFYEQMFDLH 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 66/202 (32.67%), Postives = 117/202 (57.92%), Query Frame = 2
Query:  179 QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYK-RMARARESLDGFIDSIIDEH 778
            +L    +AD+AKKYG + H+Q+G +  V +S+ +  KE ++  D   A+R  ++    + YD  D+ F+ Y   WRQMRKICV +L S R   S+  +R +E+   L+ + ++ G  V++ E +  LT +I  RAAFG+  +D  +E V+++++   +   F +AD FP    +N   + K ++ R R  +D  +++I++EH
Sbjct:   53 KLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFGAIIND-HEELVELVKDSLSMASGFELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVEEH 253          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 65/213 (30.52%), Postives = 116/213 (54.46%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVRE-EVDSTLQTV--MNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWINA-RGFYKRMARARESLDGFIDSIIDEHM 781
            N+  +    HR L  L+ +YG L+ L  G + ++ VS+ + A+EVL+  D  FANRP + A+  L     D+ FA YG +WRQM+ +C++ L + +  ES+  VRE EV++ ++ +   +++ S  N+ EL   L  ++T R A G    + +   +  K +++  +L G F I ++ P + WI+  RGF  ++          +D ++ EH+
Sbjct:   45 NLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDETARDLKKRVRQIMELLGEFPIGEYVPILAWIDGIRGFNNKIKEVSRGFSDLMDKVVQEHL 257          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 69/202 (34.16%), Postives = 114/202 (56.44%), Query Frame = 2
Query:  179 QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYK-RMARARESLDGFIDSIIDEH 778
            +L    LA +AK+YG + H+Q+G +  V +S+ +  KE ++  D   ANR  ++    + YD  D+ F+ Y   WRQMRKICV +L S R   S+  +R +EV   L+ + ++ G+ V++ E +  LT +I  RAAFGS   D   E V ++++   +   F +AD FP    +N   + K ++ R R  +D  +++I+DEH
Sbjct:   54 KLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAGAAVDMTERIETLTCSIICRAAFGSVIRDNA-ELVGLVKDALSMASGFELADMFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEH 254          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 64/213 (30.05%), Postives = 113/213 (53.05%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTT---GSKVNIGELVFALTRN-----ITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H  LA++AKKYG +++L++G+  +   STP+ AK  L+  D+ F+NRP N   T+L Y+  DM FA+YGP W+ +RK+  I +   +  + W  VR++    +   M  +   G  V + E++     N     +  +  FGS   +  +EF  ++ E   + G FNI DF P + W++ +G    M R  +  D  +  +++EH
Sbjct:   50 LRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQGSE-SNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGMKRLHKKFDALLTRLLEEH 261          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 64/213 (30.05%), Postives = 113/213 (53.05%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTT---GSKVNIGELVFALTRN-----ITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H  LA++AKKYG +++L++G+  +   STP+ AK  L+  D+ F+NRP N   T+L Y+  DM FA+YGP W+ +RK+  I +   +  + W  VR++    +   M  +   G  V + E++     N     +  +  FGS   +  +EF  ++ E   + G FNI DF P + W++ +G    M R  +  D  +  +++EH
Sbjct:   50 LPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQGSE-SNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGMKRLHKKFDALLTRLLEEH 261          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C7D95_MENSP3.295e-2733.17Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C75A2_SOLME3.295e-2729.72Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A4_GENTR5.621e-2731.60Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71E1_SORBI5.621e-2734.254-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BX_ARATH5.621e-2733.18Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENGR9.588e-2732.67Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71AD_ARATH9.588e-2730.52Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI1.635e-2634.16Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C75A7_EUSGR2.136e-2630.05Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR2.136e-2630.05Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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