FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.790e-26
Identity = 77/210 (36.67%), Postives = 111/210 (52.86%), Query Frame = 2
Query:  197 LADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK-----------VNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINA-RGFYKRMARARESLDGFIDSII---DEH 778
            L +LA KYG ++ L+MG I  V VS+P  A+EVL+ +D++FA+RP+ +      YD  D+ FA YG +WR +RK+C ++L S +     A VR   D TL  V N   +            V +  L+   T  IT +AAFG +   + Q++F+  L    K  G F   D FP + +I+A  G   R+ RAR  LD   D II   +EH
Sbjct:   84 LRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRN--DETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQACGVELQEQFLTALDVGLKFSGGFCFGDLFPSLRFIDAMTGLRSRLWRARGQLDSVFDKIIAQCEEH 291          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.643e-26
Identity = 59/213 (27.70%), Postives = 116/213 (54.46%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVM---NTTGSKVNIGELVFALTRNITYRAAFGS--FSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  +    HR L  L+ +YG L+ L  G + ++ VS+ D+A ++++  DL  ANRP    I  +     ++ F+ YG +WRQ++ +CV+ L +++  +S+A VREE  S +   +   ++  S +N+ +L+  LT ++  R +FG    +     +F   +++ ++L G F ++++ P + WI+  RG Y R     +     +D ++ EH+
Sbjct:   44 NLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFGKKHSNEASMSDFKNQVRKITELVGGFPVSEYIPCLAWIDQIRGLYNRAEEVSKIFGDLMDKVVQEHL 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.060e-25
Identity = 68/217 (31.34%), Postives = 115/217 (53.00%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMN---TTGSKVNIGELVFALTRNITYRAAFGSFSHD----GQDEFVKILQEFSKLFGAFNIADFFP-WMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +  HR    L++ YG ++ L  G + VV VST + A+EVL+  DL    RP   A    +Y+  D+ FA YG  WR+MRK+ +++LFS ++ +++  +REE    L   ++    T + V++ + +F+ T +I  R AFG   H+      D+   ++ E     G+F   DFFP  +GW+  R  G +  + +A   L  F   +ID+H+
Sbjct:   40 NLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEDLVLESETNLGSFAFTDFFPAGLGWVIDRISGQHSELHKAFARLSNFFQHVIDDHL 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.384e-25
Identity = 70/213 (32.86%), Postives = 120/213 (56.34%), Query Frame = 2
Query:  161 NMAMMDQLT-HRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFALTRNITYRAAFG-SFSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWI-NARGFYKRMARARESLDGFIDSIIDE 775
            N+  + +L   R  A  AKKYG +L  ++G+  +V +S+ ++AKE+L+ QD+ FA+RP +    +++Y R DMA  +Y P++R++RK+ +  LFS  R  ++  VREE    +   +N    K   V+I EL+   T ++  R AFG  ++ DG++   F+KIL     + G    +DFFP+ G++ +  G    M    E  D +I  +++E
Sbjct:   42 NLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNE 254          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.384e-25
Identity = 69/216 (31.94%), Postives = 117/216 (54.17%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFALTRNITYRAAFGSFSHDG----QDEFVKILQEFSKLFGAFNIADFFPWMGWI--NARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  ++ L H+ L +L K +G ++ LQ+G + +V +S+   A+EVL+  DL   +RP  +A   ++Y+  D+ FA YG  WR +RK+ VI+LFS ++  S+  +REE +  L   ++    K   VN+ + +F L+ +I  R AFG   H+     +D    +     K+   F  ++FFP  GWI     G  K +      LDGF + ++D+H+
Sbjct:   43 NLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDSMEDLASRSEKIQAKFAFSNFFPG-GWILDKITGQSKSLNEIFADLDGFFNQVLDDHL 257          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.384e-25
Identity = 63/213 (29.58%), Postives = 114/213 (53.52%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTV--MNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  +    HR L  L+ +YG L+ L  G + ++ VS+ + A+EVL+  DL FANRP + A+  L     D+ F  YG +WRQM+ +C++ L + +   S+  +R EE++  ++ +   +++ S  N+ EL   L  ++T R A G    + +   +  K +++  +L G F I D+ P + WI+   GF  R+    +     +D ++ EH+
Sbjct:   45 NLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRKHSEDETARDLKKRVRQIMELLGEFPIGDYVPALAWIDRINGFNARIKEVSQGFSDLMDKVVQEHL 257          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.808e-25
Identity = 65/223 (29.15%), Postives = 112/223 (50.22%), Query Frame = 2
Query:  164 MAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELV--------------FALTRN---ITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            + ++  + H  LAD+A KYG +++L++G+   V  S P  A+  L+  D  F+NRP +   TYL Y+  DM FA YGP W+ +RK+C + +   +  E WA V+  EV   L+ +   +   V +  +V                L+R    IT +    + +     EF  ++ E  ++ G FNI DF P++ W++ +G  + M   ++  D  ++ +I EH
Sbjct:   51 LPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSVPVPVVVPEMLTYAMANMIGRIILSRRPFVITSKLDSSASASASVSEFQYMVMELMRMAGLFNIGDFIPYIAWMDLQGIQRDMKVIQKKFDVLLNKMIKEH 273          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.362e-25
Identity = 67/217 (30.88%), Postives = 124/217 (57.14%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSK--VNIGELVFALTRNITYRAAFG-SFSHD--GQDEFVKILQEFSKLFGAFNIADFFPWMGWI-----NARGFYKRMARARESLDGFIDSIIDEH 778
            N+  + +L H+ L  L+KKYG ++ L++G +  + +S+ + AK+ L+  DL   +RP+      L+Y+  DM+ + Y  +W+++RK+C  +LFS  + +S   ++ EEV   + ++  ++  K  VN+ +   ALT ++  +AAFG SF       D F K++++  ++ G+F+ +DF P++GWI       +G+ K+  R    LD F + I D H
Sbjct:   43 NLHQLGELQHQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESSSLKNPVNLSKTFLALTTSVVCKAAFGVSFEGSVLNSDRFNKLVRDTFEMLGSFSASDFIPYVGWIIDKFNGLQGWRKKSFR---DLDAFYEQIFDLH 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.362e-25
Identity = 70/217 (32.26%), Postives = 116/217 (53.46%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTL---QTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHD----GQDEFVKILQEFSKLFGAFNIADFFP-WMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +  HR    L+++YG ++ L+ G + VV  ST + A+EVL+  DL    RP   A    TY+  D+ FA YG  WR+MRK+ +++LFS ++ +++  +REE    L    T    T + V++ + +F+ T +I  R AFG   H+      D+  +++ E     G+F   DFFP  +GW   R  G + R+ +A   L  F   +ID+H+
Sbjct:   40 NLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEELVLESETNLGSFAFIDFFPAGLGWAIDRISGQHSRLHKAFARLSNFFQHVIDDHL 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.362e-25
Identity = 70/214 (32.71%), Postives = 112/214 (52.34%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMN---TTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDE--FVKILQEFSKLFGAFNIADFFPWMGWINAR--GFYKRMARARESLDGFIDSIIDEH 778
            N+  +  L HR L DL+ KYG ++ + +G++  V V +P+ A+EVL+  D     RP         YD   + F  +G ++R +RK+CV++LFS +R  S+ ++REE  S L    +   ++GS V++   +     + T R AFG SF   G D   F+++  E +++ G F  AD FP  GWI  R  G      ++ + LD F    I +H
Sbjct:   48 NIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSFQGSGMDNETFLELFTEANRVIGKFAAADIFPGFGWILDRISGLDSSRRKSFQDLDTFYQKAIVDH 261          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C99A2_ORYSJ2.790e-2636.67Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71AF_ARATH3.643e-2627.70Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.060e-2531.34Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH1.384e-2532.86Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BN_ARATH1.384e-2531.94Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.384e-2529.58Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME1.808e-2529.15Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71BQ_ARATH2.362e-2530.88Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH2.362e-2532.26Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH2.362e-2532.71Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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