FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.168e-22
Identity = 68/211 (32.23%), Postives = 114/211 (54.03%), Query Frame = 2
Query:  188 HRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVRE-EVDSTLQTVMNTTGS------------KVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGA-FNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDE 775
            H  L DLA K+G +++L++G +  V +S+P  A+EVL+ +D  FA+RP+ +    + Y   DM+FA YG  WR +RK+C+ +L +  +    A+VR+ E  S ++ V+   G+             VN+G LV + +  IT RA  G       DE + ++ + + L+G+ F   D FP + +++   G  +R+  AR  LD   D I+ E
Sbjct:   49 HVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAGGGGRGQRGEAPVVNLGRLVLSCSMAITGRATLGKLC---GDEIMSVV-DVAVLYGSGFCAGDLFPSLWFVDVVTGLTRRLWTARRRLDAIFDRILAE 255          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.168e-22
Identity = 60/197 (30.46%), Postives = 106/197 (53.81%), Query Frame = 2
Query:  206 LAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFALTRNITYRAAFGS-FSHDGQD--EFVKILQEFSKLFGAFNIADFFPWMGWI-NARGFYKRMARARESLDGFIDSIIDE 775
            L+K YG +  +++G   +  +S+ ++AKE+L+ QDL F  RP       ++Y   ++ F  Y  ++R+MRK+C++ LFS  R  S+  VREE    +   +     +   V++ EL+ + T  +  R AFG  ++  G +   F+ IL E   L G    +D FP+ G++ N  G   R+ +A + LD ++  ++DE
Sbjct:   57 LSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDE 253          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.110e-22
Identity = 66/217 (30.41%), Postives = 119/217 (54.84%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFALTRNITYRAAFG----SFSHDGQDEFVKILQEFSKLFGAFNIADFFP-WMGWIN--ARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  +  L HR L DL+KK+G +L L++G I +V +S+ + A+EVL+  DL    RP   A +  + D  D+AFA YG   R++RK+ +I  FS ++  S+  +REE +  +   +  +  K   V++ + +F L  +I +RA FG       H  +++  +++ E  K+ G+ + +D FP  +GW      G +K + +    +D  ++ +ID H+
Sbjct:   41 NLHQLRGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLFYLVGSIIFRATFGQRLDQNKHVNKEKIEELMFEVQKV-GSLSSSDIFPAGVGWFMDFVSGRHKTLHKVFVEVDTLLNHVIDGHL 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.213e-21
Identity = 64/218 (29.36%), Postives = 114/218 (52.29%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTG---SKVNIGELVFALTRNITYRAAFGSFSHDG----QDEFVKILQEFSKLFGAFNIADFFP--WMGWIN--ARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +L HR L  LA++YG ++ L  G + +  VS+ + A+EVL+  DL   +RP  V    L+ D  D+ F  YG  W+  RK  + +LF  ++ +S+  +REE  + L   ++ +    S V++ + +F LT +I +R A G   H+     +++  +++ E      +F  +DFFP   +GW+     G +KR+      LD     +ID+H+
Sbjct:   42 NLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALGQNFHESDFIDKEKIEELVFEAETALASFTCSDFFPVAGLGWLVDWFSGQHKRLNDVFYKLDALFQHVIDDHL 259          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.213e-21
Identity = 61/214 (28.50%), Postives = 112/214 (52.34%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGS---KVNIGELVFALTRNITYRAAFGSFSHDGQDE--FVKILQEFSKLFGAFNIADFFPWMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+  +    H  +  L++KYG L+ L+ G++  V  STP+  KEVL+  D    +RP       LTY+  D+ F  Y  +WR++RK+ V++L++ +R +S+   R+E  ++L   +    S    VN+   +  L+ ++  R  FG      + E  + +++Q   ++ G+F  AD+FP +G I  R  G + +  +  +++D F D  I  H+
Sbjct:   41 NLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKGSKLENLYEEVIQGTMEVVGSFAAADYFPIIGRIIDRITGLHSKCEKIFKAMDAFFDQSIKHHL 254          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 69/232 (29.74%), Postives = 118/232 (50.86%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYG-GLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSK--VNIGELVFALTRNITYRAAFGSFS-HDGQDEFVKILQEFSK-LFGAFNIADFFPWMGWIN--ARGFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINY 832
            ++ +M  + +  LA LA +YG  L+ L++GA+  V VS+P +A+ VL+  D VF++RP ++    + Y   D  FA YG  +R+ RK+  + L +  +  S    R EEV   L  V     ++  V++ EL+ +   N+  RA  G FS  +G++   + L + +  L G F+I D+FP +G I    +    +  R R+  D  +D +ID+H          D++    Y
Sbjct:   80 HLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDDKDFIY 311          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.702e-21
Identity = 53/178 (29.78%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  266 VSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSK--VNIGELVFALTRNITYRAAFGS--FSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWIN-ARGFYKRMARARESLDGFIDSIIDEHM 781
            +S+ D+A +V++  DL FANRP   A+  +     D+AF++YG +WRQM+ +C + L  R+   S+  VR EE+ S +  +   + S   VN+ +L+  ++ ++  R A G      +   +F   L++  +L GAF + D+ P + WI+  RG  ++M    ++   F++ ++ EH+
Sbjct:   82 ISSSDVAHDVMKTHDLKFANRPKTKAVDIIINGGRDVAFSSYGEYWRQMKSLCTVHLLGRQMVRSFEKVREEEITSVIWKLEKQSSSSLPVNLSDLLLNMSNDVICRIAVGRKYSREENTSDFENQLRKVMELLGAFPVGDYIPGLAWIDKVRGLDRKMEEVSKTFVEFLERVVQEHV 259          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.529e-21
Identity = 59/236 (25.00%), Postives = 119/236 (50.42%), Query Frame = 2
Query:  179 QLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVN---------------------------IGELVFALTRNITYRAA-----FGSFSHDGQDE---FVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            Q  H+ L  L  KYG +  +++GA + + +S  ++AKE     D+V ++RP  VA+  ++Y++A + +A YG +WRQ+RKI  +++ S RR E  + +R  EV ++++ ++N   ++++                           + +    LT N+  R       FG    + ++E   F++ +++F +L G F + D  P++ W++  G  K M +  +  D  ++  ++EH
Sbjct:   55 QTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQISSQYGLLDDTKSSSTNDEPSTTDYVSVELKKWFAQLTLNMVLRMVVGKRCFGDVDVENKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKWLDLGGHEKEMKKCAKKFDVMLNEWLEEH 290          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.529e-21
Identity = 63/217 (29.03%), Postives = 116/217 (53.46%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVM---NTTGSKVNIGELVFALTRNITYRAAFGSFSHD----GQDEFVKILQEFSKLFGAFNIADFFP-WMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +L H     L+ ++G ++ L+ G + +V +S+ + AK+VL+++DL   +RP  VA    T +  D+AFA YG  WR+M+K+  ++LF+ ++ + +  +REE    L   +   + T + V++ +  F+ T  I +R +FG    +      D   +++QE      +F   DFFP  +GW+  R  G + R+ +A   L  F   +IDE +
Sbjct:   42 NLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSSQTQTLVDLRKAFFSFTAGIIFRVSFGQNFRECDFIDMDRLEELVQESETNVFSFAFTDFFPTGLGWLVDRISGQHSRIEKAFSKLTKFFQHVIDEEL 258          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.529e-21
Identity = 55/215 (25.58%), Postives = 115/215 (53.49%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFALTRNITYRAAFGSFSHDG---QDEFVKILQEFSKLFGAFNIADFFPWMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +  HR + +L+K YG L+ L++G++  V  ++ +  ++VL+  DL   +RP       +TY+  D+ F+ Y  +WRQ+RK+ V++L++ +R +S+  +REE  ++         S    VN+ + +  ++ ++  R  FG  + +G   ++ + +I+ +  ++ G+    D+FP +G I  R  G + +  +    +D F D  I  H+
Sbjct:   41 NLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFG-INLEGSKLENTYQEIIVQAFEVLGSLAAVDYFPVIGTIIDRITGLHAKCEKVFHGIDSFFDQAIQRHI 254          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C99A1_SORBI4.168e-2232.23Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C83B1_ARATH4.168e-2230.46Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH7.110e-2230.41Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BJ_ARATH1.213e-2129.36Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH1.213e-2128.50Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71C4_MAIZE1.584e-2129.74Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AS_ARATH2.702e-2129.78Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C82A1_PEA3.529e-2125.00Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71B8_ARATH3.529e-2129.03Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR3.529e-2125.58Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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