FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.609e-21
Identity = 64/219 (29.22%), Postives = 114/219 (52.05%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSK---VNIGELVFALTRNITYRAAFGSFSHD----GQDEFVKILQEFSKLFGAFNIADFFPWM-----GWINARGFYKRMARARESLDGFIDSIIDEHM 781
            N+    +L  R   +L++KYG ++ L+ G + VV +S+ + A+EVL+  DL   +RP  V    ++Y+  D+ FA YG  WR MRK+ V++LFS ++ +S+  +REE +      ++   S+   VN+ + +F L  +I  R  FG    +     +D    ++ +   +      +DFFP +      WI +    KR+ R    +D F  +I+D+H+
Sbjct:   40 NLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRECEFVDEDSIDDLVHKSEDVIRNSIFSDFFPGLMGRLIEWIFSE--RKRLNRLYSEVDTFFQNILDDHL 256          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.609e-21
Identity = 64/218 (29.36%), Postives = 114/218 (52.29%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTG---SKVNIGELVFALTRNITYRAAFGSFSHDG----QDEFVKILQEFSKLFGAFNIADFFP--WMGWIN--ARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +L HR L  LA++YG ++ L  G + V  VS+ + A+EVL+  DL   +RP  V    L+ +  D+ F  YG  W+  RK  + +LF  ++ +S+  +REE  + L   ++ +    S V++ + +F LT +I +R A G   H+     +++  +++ E      +F  +DFFP   +GW+     G +KR+      LD     +ID+H+
Sbjct:   42 NLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFFRVALGQNFHESNFIDKEKIEELVFEAETALASFTCSDFFPVAGLGWLVDWFSGQHKRLNDVFYKLDALFQHVIDDHL 259          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.609e-21
Identity = 64/225 (28.44%), Postives = 119/225 (52.89%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMN--TTGSKVNIGELVFALTRNITYRAAFGSFSHDGQ--DEFVKILQEFSKLFGAFNIADFFPWMGWINAR--GFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDE 814
            N+  +     R L  L++KYG L+ L+ G +  V  STP+  K+VL+  D    +RP       +TY+  D+AF+ Y  +WR++RK+ VI+L++ +R +S+ +VR EEV S +  +    +    VN+ + +  L+ ++  +  FG      +  + + +++Q   ++ G F  AD+FP +G I  R  G + +  +  + +D F D  I  H+      N++D+
Sbjct:   41 NLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISLEWSKLANTYEEVIQGTMEVVGRFAAADYFPIIGRIIDRITGLHSKCEKVFKEMDSFFDQSIKHHL---EDTNIKDD 262          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.019e-21
Identity = 65/214 (30.37%), Postives = 104/214 (48.60%), Query Frame = 2
Query:  188 HRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGE-------------LVF-ALTRNITYRAAFGSFSHDGQ--DEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            H+ L DLA KYG +  +++GA + V VS  +MAKE     D+  ++ P  ++   L Y+R+ +  A YGP+WRQ+RKI + +  S  R E    VR  EV S++  +     S  N+               LVF  + R +  +  F + + D +  +  VK + EF +L   F + D  P++ W +  G+   M    + LD  I   +DEH
Sbjct:   60 HKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKANRCVKAVDEFVRLAATFTVGDAIPYLRWFDFGGYENDMRETGKELDEIIGEWLDEH 273          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.019e-21
Identity = 66/215 (30.70%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEV-DSTLQTVMN--TTGSKVNIGELVFALTRNITYRAAFG----SFSHDGQDEFVKILQEFSKLFGAFNIADFFP-WMGWINAR--GFYKRMARARESLDGFIDSIIDE 775
            N+  + +L H  L  L+ ++G ++ ++ G + +   S+ + AKEVL+  DL   NRP  VA    T+   D+ F  YG  WR+M+K   ++LFS ++ +S+  +REE  D  ++ + N   T + V++ + +F+ T +I +R AFG       +   D+  +++QE      +    DFFP  +GW+  R  G + RM  A   L  F + +IDE
Sbjct:   40 NLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDE 254          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.027e-20
Identity = 58/215 (26.98%), Postives = 120/215 (55.81%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSK--VNIGELVFALTRNITYRAAFGSFSHDG---QDEFVKILQEFSKLFGAFNIADFFPWMGWINAR--GFYKRMARARESLDGFIDSIIDEHM 781
            N+  +    HR +  L++KYG L++L++G +  V  STP+  K+VL+  D    +R        ++Y+  D+AFA Y  +W+ +RK+ V++L++ +R +S+ ++R EEV S ++ + ++   +  VN+ + +  L+ ++  R  FG  + +G   ++ + +++    ++ G+F  +D+FP +G I  R  G + +  +  +  D F D  I  H+
Sbjct:   41 NLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFG-INLEGSKLENTYEEVIHGTMEVLGSFAASDYFPVIGGIIDRITGLHNKCEKVFKGTDSFFDHCIKHHL 254          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.287e-20
Identity = 64/217 (29.49%), Postives = 114/217 (52.53%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTG---SKVNIGELVFALTRNITYRAAFG----SFSHDGQDEFVKILQEFSKLFGAFNIADFFP-WMGWI--NARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  +  L H+ L DL+KK+G +L L++G + +V +S+ + A+E L+  DL    RP     + L  D  D+  A YG   R++RK+  +K FS  +  S+  +REE +  +   +       S V++ + +F L  +I +R+AFG      +H   ++   ++ E  KL GA + +D FP  +GW      G  K++ +    +D  ++ IID+H+
Sbjct:   38 NLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMFEVQKL-GALSNSDLFPGGLGWFVDFVSGHNKKLHKVFVEVDTLLNHIIDDHL 253          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.987e-20
Identity = 66/219 (30.14%), Postives = 117/219 (53.42%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTL---QTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQ---DEFVKILQEFSKLFGAFNI-ADFFP-----WMGWINARGFYKRMARARESLDGFIDSIIDEHM 781
            N+  + +L  R   +L  KYG ++ L+ G + +V +S+ + A+EVL+  DL   +RP       ++Y+  D+ FA YG  W+ MRK+ V++LF+ ++ + + S+REE +  L    T +  T S VN+ + +F L  +I  R  FG   H+ +   +  +  L + S++    ++ +DFFP     ++ WI+  G  KR       LD F  +I+D H+
Sbjct:   40 NLHQLQELPPR---NLNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFGFNLHECEFIDENSISDLVDKSEILEMTSMFSDFFPGGIGRFIDWIS--GQNKRFDNVFSDLDTFFQNILDYHL 253          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.902e-20
Identity = 64/230 (27.83%), Postives = 116/230 (50.43%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGS--KVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEHMXXXXXXNVRDEEGKINYNDG 841
            +M M+  L H+   +L+ +YG L  L  G++  V  STP  AK++LQ  +L F  R  + A+  LTY+ + +AFA YG +WR ++K+ + +L   R   ++  +R +E    L+ + N   +   VNI E +  LT N+      G       +E   ++++ +++FG FN++DF      ++ +GF KR+    +  D  ++ II +            ++G+    DG
Sbjct:   45 HMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYE-SSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVISIMMVGE-----AEEARDVVRDVTEIFGEFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKKGEQGSGDG 268          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.096e-20
Identity = 56/212 (26.42%), Postives = 105/212 (49.53%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVM---NTTGSKVNIGELVFALTRNITYRAAFGS--FSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWI-NARGFYKRMARARESLDGFIDSIIDEH 778
            N+  +    HR L+ L+ ++G L+ L+ G + V+ VS+ D+A +V++  DL FANRP   +   ++    D+ FA YG +WR ++ +C I L S +  +S    REE  + L   +   + + S VN+ +L+  +  +I  +   G      +G  +   I + F    G   + ++ P + WI    G   ++ +  +    FI+ ++ EH
Sbjct:   44 NLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEEGTIDVKTITKSFLDAVGLSPVGEYIPSLAWIGKITGSDGKLEKITKQFGDFIEKVLQEH 255          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C71BS_ARATH4.609e-2129.22Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH4.609e-2129.36Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH4.609e-2128.44Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C82A2_SOYBN6.019e-2130.37Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71BU_ARATH6.019e-2130.70Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH1.027e-2026.98Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH2.287e-2029.49Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH2.987e-2030.14Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC3.902e-2027.83Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71AG_ARATH5.096e-2026.42Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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