FC877818

Overview
NameFC877818
Unique NameFC877818
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 59/212 (27.83%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  188 HRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVMNTTGSKVNIGELVFALTR--------NITYRAAFG------SFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDEH 778
            H+ L  LA+K+G L  +++GA   + VS  +MA+E     D+  + RP  +    + Y+ A +  A YGP+WR++RKI V ++ S  R E    VR  EV +++  + +   S+ N  +      +        N+  R   G      + + +  ++ VK + EF +L G F + D  P++ W++  G+ K M    + LD  I   ++EH
Sbjct:   63 HKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPYLRWLDFGGYEKAMKETAKELDVMISEWLEEH 274          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19
Identity = 60/217 (27.65%), Postives = 114/217 (52.53%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTG---SKVNIGELVFALTRNITYRAAFG-SFS---HDGQDEFVKILQEFSKLFGAFNIADFF--PWMGWI--NARGFYKRMARARESLDGFIDSIIDEH 778
            N+  +  + HR L +L+KK+G ++HLQ+G + +V +S+ + A+E L+  D+    RP   A    + +  ++    Y   WR++RK+ V + FS ++ +S+  VREE +  +   +       S V++ + +F L  +  +R  FG SFS   H  +++  +++ E  K    F  +D F  P +GW      G +K + +    +D F++ +ID+H
Sbjct:   44 NLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEELVFEAQKSL-TFKFSDLFPIPGLGWFIGFVSGQHKGLHKVFIEVDNFLNHMIDDH 259          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.634e-19
Identity = 60/217 (27.65%), Postives = 113/217 (52.07%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTG---SKVNIGELVFALTRNITYRAAFGSFSHDGQ----DEFVKILQEFSKLFGAFNIADFFP--WMGWIN--ARGFYKRMARARESLDGFIDSIIDEH 778
            N+  + +L HR    LA++ G ++ L +G + V  +S+ + A+EVL+  DL   +RP  V    ++    D+ F  YG  W++ R+  V +LF  ++ +S+  ++E   + L   ++ +    S V++ + +F L  +I +R AFG   H+ +    D+  +++ E     G+F  +DFFP   +GW+     G +KR+      LD  +  +ID+H
Sbjct:   42 NLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILFRVAFGQSFHESEFTDTDKIDELVFETETAQGSFTCSDFFPIAGLGWLVDWISGQHKRLNDVFLKLDALLQHVIDDH 258          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.610e-19
Identity = 58/212 (27.36%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPA-NVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWASVR-EEVDSTLQTVM--NTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQ---DEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDE 775
            ++ ++  + H+    L+ ++G ++ L +G++  V  ST + AKE L+  ++ F+NRP  NVA+ +LTY      F  YGP  + ++K+C+ +L   R  + +  VR +E    ++ V+     G  V+ G     L+ NI  R      S + +   +E   ++ + ++L G FN++DF  ++   + +GF KR+ + R   D  +D II +
Sbjct:   41 HLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVQFLTY-----VFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSEDEKQAEEMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRIRKTRIRFDAVLDRIIKQ 247          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 74/247 (29.96%), Postives = 112/247 (45.34%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRR--------REESWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAF--NIADFFPWMGWINARGFYKRMARARE-SLDGFIDSIIDEHMXXXXXXNVRDEEGKINYN---DGEAEAEADTDMV 874
            D L HR L DLAKK+G +  L+MG  ++V VS+PD++KEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+ +         EE  A V E+V    +   N    +  +  +++     I +   F S      ++   +  E S+L  +F  N  DF P +     RG+ K     +E  L  F D  +DE        N+ +E  K   +   D + + E + D V
Sbjct:   51 DDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNKLKALNGERSRLAQSFDYNYGDFIPILRPF-LRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMSNEGLKCAIDHILDAQKKGEINEDNV 296          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.639e-18
Identity = 67/206 (32.52%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  188 HRGLADLAKKYG--GLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKL------FSRRREESWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQEFS-KLFGAFNIADFFPWMGWINARGFYKRMARARESLDGFIDSIIDE 775
            H    DL  KYG  GL+ +Q+GA+  + VSTP  A+ VL+  D V A+RP N     + Y+  D+AFA YG +WR  RK+    L      FS+RRE     VR  V         + G+ +++ EL+     +   RA  G S    G+++  + L E S  L G FN+ D+FP +  ++   F + +    +S+    DS+ +E
Sbjct:   77 HVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRRERE-EEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKLADVDL--FLRIICAKAKSVSKRWDSLFNE 279          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.796e-18
Identity = 74/247 (29.96%), Postives = 113/247 (45.75%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREESWA-SVREEVDSTLQTVMNTTGSKVN---IGELVFALTRNITYRAAFGSFSHDGQDEFVKILQ----EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARE-SLDGFIDSIIDEHMXXXXXXNVRDEEGKINYN---DGEAEAEADTDMV 874
            D L HR L DLAKK+G +L L+MG  ++V VS+P+++KEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+ +  + +     EE    ++ V    G+  +   +   +  +  N  YR  F       +D     L+    E S+L  +F  N  DF P +     RG+ K     +E  L  F D  +DE        N+ +E  K   +   D + + E + D V
Sbjct:   51 DDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFNKLKALNGERSRLAQSFDYNYGDFIPILRPF-LRGYLKICQEVKERRLQLFKDYFVDERKKLASTKNMCNEGLKCAIDHILDAQKKGEINEDNV 296          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18
Identity = 68/226 (30.09%), Postives = 105/226 (46.46%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREE----SWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQ---EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARE-SLDGFIDSIIDEHMXXXXXXNVRDEEG 820
            D L HR L D AK++G +  L+MG  ++V VS+P++AKEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+ +  +     W S  E V + ++     +   + I + +  +  NI YR  F   F  +    FVK+     E S+L  +F  N  DF P +     +G+ K     ++  L  F D  +DE        +    +G
Sbjct:   51 DDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPF-LKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKSTTSNDG 275          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18
Identity = 73/247 (29.55%), Postives = 112/247 (45.34%), Query Frame = 2
Query:  176 DQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRREE----SWASVREEVDSTLQTVMNTTGSKVNIGELVFALTRNITYRAAFG-SFSHDGQDEFVKILQ---EFSKLFGAF--NIADFFPWMGWINARGFYKRMARARE-SLDGFIDSIIDEHMXXXXXXNVRDEEGKINYN---DGEAEAEADTDMV 874
            D L HR L DLAK++G +  L+MG  ++V VS+P++AKEVL  Q + F +R  NV     T    DM F  YG  WR+MR+I  +  F+ +  +     W S    V   ++   +     + +   +  +  N  YR  F   F  +    FVK+     E S+L  +F  N  DF P +     +G+ K     +E  L  F D  +DE M      +  +E  K   +   D + + E + D V
Sbjct:   51 DDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPF-LKGYLKICKEVKERRLKLFKDYFVDERMKLESTKSTSNEGLKCAIDHILDAQKKGEINEDNV 296          
BLAST of FC877818 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18
Identity = 65/257 (25.29%), Postives = 126/257 (49.03%), Query Frame = 2
Query:  161 NMAMMDQLTHRGLADLAKKYGGLLHLQMGAIHVVAVSTPDMAKEVLQAQDLVFANRPANVAITYLTYDRADMAF-ANYGPFWRQMRKICVIKLFSRRREESWASVREEVDSTLQTVMNTTGSKVNIGEL-------VFALTRNITYRAAFGSFSHDGQDEFVKILQEFSKLFGAFNIADFFPWMGWINARGFYKRMARARESL----DGFIDSIIDEHMXXXXXXNVRDE---EGKINYNDGEAEAEADTDMVDELM 886
            N+  + +  H   ADLAK YG ++ L+ G ++ V +++P+ A+EVL+  D + + R +N +I    ++   + +       WR +RK+ V  +FS +R E+  ++R +    L + MN +  +    ++       V  +  NI +    GS+     +EF   +    +  G  + A++FP+MG+++ +G  K M    E L     GF+D+ I E        +V +    +  +  N+G+ EAE D + ++ L+
Sbjct:   50 NIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNILFSVDLGSYDSKKSNEFQDTVIGAMEAAGKPDAANYFPFMGFLDLQGNRKAMRGLTERLFRVFRGFMDAKIAEKSLGNYSKDVSNRDFLDSLLILNEGD-EAELDNNDIEHLL 305          
The following BLAST results are available for this feature:
BLAST of FC877818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
C82A4_SOYBN6.655e-2027.83Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C71BP_ARATH1.483e-1927.65Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH5.634e-1927.65Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN9.610e-1927.36Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
TCMO_POPKI1.639e-1829.96Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C71C1_MAIZE1.639e-1832.52Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
TCMO_POPTM2.796e-1829.96Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_MEDSA8.135e-1830.09Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_GLYEC8.135e-1829.55Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C76C4_ARATH8.135e-1825.29Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA58BG11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA58BG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877818 ID=FC877818; Name=FC877818; organism=Citrus clementina; type=EST; length=892bp
TCGACTTACAGCCATGGATTCGCTGCTTCAAACTCTTCAATCATCACCAA
TCTTCTTCATCATTCTTCCTCTCTTACTGGCTTTCGTTCTCTTCTCATTA
ACAACCTTACGTAAAAAACTCCCATACCCTCCAGGCCCAAAAGGGTATCC
GATCATCGGCAACATGGCCATGATGGACCAACTGACTCACCGCGGCCTCG
CAGACCTTGCCAAGAAATACGGCGGCCTCCTCCATCTCCAAATGGGAGCA
ATTCATGTCGTCGCCGTATCGACGCCGGACATGGCTAAAGAAGTTCTTCA
GGCTCAAGATCTCGTCTTCGCAAACCGGCCAGCAAACGTGGCCATAACAT
ATCTAACTTACGACAGAGCCGACATGGCGTTTGCCAACTACGGACCCTTT
TGGCGACAAATGCGAAAGATCTGCGTGATTAAGCTCTTCAGCAGAAGACG
AGAGGAATCGTGGGCGTCAGTAAGAGAAGAGGTGGACTCAACATTACAAA
CAGTGATGAACACAACAGGCTCAAAAGTTAATATAGGCGAATTAGTGTTT
GCTCTAACGAGGAACATTACATATAGGGCAGCATTTGGGTCGTTTTCACA
TGATGGGCAAGATGAATTTGTGAAGATTCTGCAAGAATTTTCCAAGCTTT
TTGGGGCATTTAATATTGCCGATTTTTTTCCGTGGATGGGGTGGATTAAT
GCGAGGGGATTTTATAAGAGGATGGCTAGGGCAAGGGAGTCACTAGATGG
GTTCATTGATAGCATTATTGATGAGCACATGAAGAAGAAGAAGAAGAAGA
ATGTCCGAGATGAAGAAGGCAAAATTAATTACAATGATGGTGAAGCTGAG
GCTGAGGCTGATACTGATATGGTCGATGAATTAATGGCTTTT
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