FC877819

Overview
NameFC877819
Unique NameFC877819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length908
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6543 contig Ccv1_Contig6543:4..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC877819 vs. ExPASy Swiss-Prot
Match: DAT_CATRO (Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 63/274 (22.99%), Postives = 116/274 (42.34%), Query Frame = 1 
Query:  100 LIVPARPTPRELKQLS-DIDDQESFRFHIPVIFLYKNNSASSPPLLKEKDPVKVIKEAISEALVYYYPFAGRLIEGPNRKLMVDCNGEGILFLEAEANFKLEQ-LGGAIQPPCPYLEQLTYNVPGSEGILGCPLLLIQVTRLMCGGFTLAIRFNHTMCDASGLVQFMKTIEEMARGANTPSLFPVWQRKRLCARNPPQVTNVHLEYEEINNNSDTFI----TTNPNEMDHKSFYFGPKEVRVLKNQ-LPLHLRNCSTFELLAGCMWRCRTICSQ 900
            LI P+ PTP+ L + +   +DQ  ++  + V F Y+N        ++E+     ++ ++S+ LV YYPFAG++++       + CN +GI F+E     ++   L   ++     L        GSE        ++Q++   CGG  +A   +H + D   +  FMK                 W        +   V    L  + I    D  I     T+ N ++ K+F F P+ +  LK++ +   +   +  E+L   + RC T+  +
Sbjct:   17 LIKPSSPTPQSLSRYNLSYNDQNIYQTCVSVGFFYENPDGIEISTIREQ-----LQNSLSKTLVSYYPFAGKVVKND----YIHCNDDGIEFVEVRIRCRMNDILKYELRSYARDLVLPKRVTVGSEDTTA----IVQLSHFDCGGLAVAFGISHKVADGGTIASFMKD----------------WAASACYLSSSHHVPTPLLVSDSIFPRQDNIICEQFPTSKNCVE-KTFIFPPEAIEKLKSKAVEFGIEKPTRVEVLTAFLSRCATVAGK 260
The following BLAST results are available for this feature:
BLAST of FC877819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DAT_CATRO9.898e-1122.99Deacetylvindoline O-acetyltransferase OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877819 ID=FC877819; Name=FC877819; organism=Citrus clementina; type=EST; length=908bp
AAGCCTTACCAGAACAACCAAACTAGTAACTAACATTGAAAATTTAAAAT
GGCTCCAAAATTTTCTCTAGTTTTGTCAGTAACCCGGCAGGCACCGGAAT
TAATTGTTCCGGCAAGGCCAACACCGCGTGAATTAAAGCAACTTTCCGAT
ATAGACGACCAAGAAAGTTTCAGGTTTCATATTCCAGTAATATTCCTTTA
CAAGAATAACTCTGCATCATCACCTCCACTACTCAAAGAAAAAGATCCCG
TGAAGGTCATCAAGGAAGCTATAAGTGAAGCACTTGTGTATTATTACCCT
TTTGCTGGTAGGCTTATAGAAGGTCCCAACCGCAAGCTTATGGTGGATTG
CAATGGTGAAGGGATCTTGTTTCTCGAGGCTGAAGCTAACTTCAAACTTG
AGCAGCTTGGCGGTGCTATTCAGCCTCCATGCCCGTATTTGGAACAATTG
ACCTATAATGTTCCAGGTTCTGAAGGCATCCTTGGTTGCCCATTGCTCTT
AATTCAAGTGACTCGTTTGATGTGTGGAGGATTCACTCTTGCGATACGTT
TCAACCACACAATGTGTGATGCATCTGGTTTGGTACAATTTATGAAAACG
ATAGAGGAGATGGCAAGAGGTGCAAATACACCTTCGCTATTCCCTGTTTG
GCAACGGAAACGCTTATGTGCTAGAAATCCACCACAAGTAACAAATGTTC
ACTTAGAATACGAAGAAATAAATAACAATTCAGATACCTTCATAACTACC
AATCCAAATGAAATGGACCACAAATCATTCTACTTTGGTCCCAAAGAAGT
GAGAGTCCTCAAAAATCAACTTCCATTACACCTTAGAAATTGTTCAACAT
TTGAGTTGTTGGCTGGTTGTATGTGGAGATGTAGAACAATTTGCTCTCAA
CTGGACCC
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