FC877825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 6.080e-24 Identity = 72/258 (27.91%), Postives = 121/258 (46.90%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--------FSRVTSMAITSD------------GSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK------KKCRSLEN---HFIT 914 +I + D + T++G +D++ ++ KLL S I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L+ S S+D TVRVW + K+C A L +H ++ +S + SD G LLS RDK + +WD+ C +T+ ++ PG F S + +TI+ K+C N HF+T Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKF--ILSCADDKTIRIWDYKNKRCMKTLNAHEHFVT 384 HSP 2 Score: 95.9005 bits (237), Expect = 3.452e-19 Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 3 Query: 264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK 878 K + G +T + P ++ ++ I+VWD T R+ KGH ++ SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV T H V + DG+ + S D+ V +W + CK + +E V + P S++ + S + +T K Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKK 303 HSP 3 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 52/214 (24.30%), Postives = 98/214 (45.79%), Query Frame = 3 Query: 210 ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS------------------LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE 797 +C+ +I + D T+ G ++++A+ P+ + S+ + I++W++ T C++++ GH + + G L+A+ D+ V VW V C + H+ VV I + P++ S L SGS D T+++WD+ C+ TL H + V + G +LS DK + +WD ++ C T+ +E Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHE 380 HSP 4 Score: 77.7962 bits (190), Expect = 9.729e-14 Identity = 47/213 (22.07%), Postives = 91/213 (42.72%), Query Frame = 3 Query: 183 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD-----------------GPAIGMACHPSGG---LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 ++ + ++ + ++I + ++ T G + + + + D L+ S + + +RVW ++T +C + H+ A G SG L + D+ + +WD+ G C GH V + FHP + S +DD T+R+WD K+C+ TL+ H VTS+ +++ D+ V +W+ R Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGG--KFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: LIS1A_XENLA (Lissencephaly-1 homolog A OS=Xenopus laevis GN=pafah1b1-A PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 6.080e-24 Identity = 72/258 (27.91%), Postives = 121/258 (46.90%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--------FSRVTSMAITSD------------GSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK------KKCRSLEN---HFIT 914 +I + D + T++G +D++ ++ KLL S I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L+ S S+D TVRVW + K+C A L +H ++ +S + SD G LLS RDK + +WD+ C +T+ ++ PG F S + +TI+ K+C N HF+T Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKF--ILSCADDKTIRIWDYKNKRCMKTLNAHEHFVT 384 HSP 2 Score: 95.9005 bits (237), Expect = 3.452e-19 Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 3 Query: 264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK 878 K + G +T + P ++ ++ I+VWD T R+ KGH ++ SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV T H V + DG+ + S D+ V +W + CK + +E V + P S++ + S + +T K Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKK 303 HSP 3 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 52/214 (24.30%), Postives = 98/214 (45.79%), Query Frame = 3 Query: 210 ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS------------------LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE 797 +C+ +I + D T+ G ++++A+ P+ + S+ + I++W++ T C++++ GH + + G L+A+ D+ V VW V C + H+ VV I + P++ S L SGS D T+++WD+ C+ TL H + V + G +LS DK + +WD ++ C T+ +E Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHE 380 HSP 4 Score: 77.7962 bits (190), Expect = 9.729e-14 Identity = 47/213 (22.07%), Postives = 91/213 (42.72%), Query Frame = 3 Query: 183 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD-----------------GPAIGMACHPSGG---LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 ++ + ++ + ++I + ++ T G + + + + D L+ S + + +RVW ++T +C + H+ A G SG L + D+ + +WD+ G C GH V + FHP + S +DD T+R+WD K+C+ TL+ H VTS+ +++ D+ V +W+ R Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGG--KFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23 Identity = 62/192 (32.29%), Postives = 98/192 (51.04%), Query Frame = 3 Query: 189 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDL 758 S DG+ I+ + VD +EG + ++ ++L+ ++ R IR+WDL +C R + H + +A P L+ +AG D + VW+V G C H F GH+ VSSI F P + ++ SGS D T++VW++ KC TL H + V+++ ++ DGS S G+D LWDL Sbjct: 33 SRDGTVISWKANPDRHSVDSDYGLPNHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDL 223
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.941e-23 Identity = 62/192 (32.29%), Postives = 98/192 (51.04%), Query Frame = 3 Query: 189 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDL 758 S DG+ I+ + VD +EG + ++ ++L+ ++ R IR+WDL +C R + H + +A P L+ +AG D + VW+V G C H F GH+ VSSI F P + ++ SGS D T++VW++ KC TL H + V+++ ++ DGS S G+D LWDL Sbjct: 33 SRDGTAISWKANPDRHSVDSDYGLPSHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDL 223 HSP 2 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 45/169 (26.63%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 276 EGGSDTITALALSP--DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK-GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF---SRVTSMAITSDGSALLSAGRDKVVNLWDLRD 764 +G D ++++ SP + ++ S I+VW+++ KC R+ KGH + P G L A+ G D L+WD+ G FK + ++ I F P+ + + ++ V+DL +K +A L S S+A ++DG+ L S +D ++ +W + D Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTG--EQLFKINVESPINQIAFSPN---RFWMCVATERSLSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLYSGHKDNLIRVWSISD 310
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.941e-23 Identity = 62/192 (32.29%), Postives = 98/192 (51.04%), Query Frame = 3 Query: 189 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDL 758 S DG+ I+ + VD +EG + ++ ++L+ ++ R IR+WDL +C R + H + +A P L+ +AG D + VW+V G C H F GH+ VSSI F P + ++ SGS D T++VW++ KC TL H + V+++ ++ DGS S G+D LWDL Sbjct: 33 SRDGTAISWKANPDRHSVDSDYGLPSHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNV-AGECMHEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDL 223 HSP 2 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 45/169 (26.63%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 276 EGGSDTITALALSP--DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK-GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF---SRVTSMAITSDGSALLSAGRDKVVNLWDLRD 764 +G D ++++ SP + ++ S I+VW+++ KC R+ KGH + P G L A+ G D L+WD+ G FK + ++ I F P+ + + ++ V+DL +K +A L S S+A ++DG+ L S +D ++ +W + D Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTG--EQLFKINVESPINQIAFSPN---RFWMCVATERSLSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLYSGHKDNLIRVWSISD 310
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 71/223 (31.84%), Postives = 111/223 (49.78%), Query Frame = 3 Query: 189 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFS 851 S GS +A G+ I++ D+++ T+EG +D + A+A SPD LL S +R+WD++ + ++GH + +A P G ++A+ D +W+V G KGH V ++ F P D S++ SGS D T+R+WD+ K L V S+A + DGS L+ G D V+LWD+ T + + V AV P G+ S S Sbjct: 468 SPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSP--DGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGS 687 HSP 2 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 62/194 (31.96%), Postives = 104/194 (53.61%), Query Frame = 3 Query: 180 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDL 758 + S DGS +A + + + +++ + + ++G +D + A+A SPD ++ S IR+WD++T K + + +A P G +L G+D V +WDV G H F+GH V ++ F PD +LL SGSDD T+R+WD+ A++ TL+ H V S+A +G+ L SA D + +W + Sbjct: 549 IAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDG--ALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739 HSP 3 Score: 89.7373 bits (221), Expect = 2.474e-17 Identity = 54/153 (35.29%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 300 ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDL 758 A+A SP LL + I VWD+++ L + +GH +A P G LLA+ D V +WDV F+GH V I F P D S++ SGS D T R+W++ A L H V ++A + DGS + S RD + LWD+ Sbjct: 464 AVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSP--DGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDV 614 HSP 4 Score: 87.4261 bits (215), Expect = 1.228e-16 Identity = 55/148 (37.16%), Postives = 76/148 (51.35%), Query Frame = 3 Query: 411 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFS 851 D A+ +A P G LLA D+ + VWDV G H +GH V ++ F P D +LL SGSDDATVR+WD+ A + A + H V +A + DGS + S RD LW++ + + + + V AV P GS S S Sbjct: 459 DREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSP--DGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGS 604
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: LIS1B_DANRE (Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 70/258 (27.13%), Postives = 118/258 (45.74%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD--------------------GSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK------KKCR---SLENHFIT 914 +I + D + T++G +D++ ++ KLL S I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +LL S S+D TVRVW + K+C A L +H V ++ + G LLS RDK + +WD+ C +T+ ++ PG F S + +T++ K+C S HF+T Sbjct: 131 TIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV--RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRF--VVSCADDKTLRIWDYKNKRCMKTLSAHEHFVT 384 HSP 2 Score: 93.2041 bits (230), Expect = 2.238e-18 Identity = 57/205 (27.80%), Postives = 89/205 (43.41%), Query Frame = 3 Query: 264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK 878 K + G +T + P L+ S+ I+VWD R+ KGH ++ +G LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV T H V + DG+ L S D+ V +W + CK + +E V + P SA + S + + K Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKK 303 HSP 3 Score: 86.2705 bits (212), Expect = 2.735e-16 Identity = 52/214 (24.30%), Postives = 100/214 (46.73%), Query Frame = 3 Query: 210 ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDT-------------DKS-----LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE 797 +C+ +I + D T+ G ++++A+ P+ + S+ + +++W+++T C++++ GH + + G LLA+ D+ V VW V C + H+ VV I + P++ KS L SGS D T+++WD+ C+ TL H + V + G ++S DK + +WD ++ C T+ +E Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHE 380 HSP 4 Score: 78.9518 bits (193), Expect = 4.367e-14 Identity = 49/213 (23.00%), Postives = 94/213 (44.13%), Query Frame = 3 Query: 183 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG--PAIGMA---CHPS---------------GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 ++ + ++ + +++ + +++ T G + + + + D LL S + + +RVW ++T +C + H+ I A HP+ G L + D+ + +WD+ G C GH V +LFHP + S +DD T+R+WD K+C+ TL H VTS+ +++ D+ V +W+ R Sbjct: 200 IMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGG--RFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 68/258 (26.36%), Postives = 119/258 (46.12%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD--------------------GSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK------KKCR---SLENHFIT 914 +I + D + T++G +D++ ++ KLL S I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L+ S S+D TVRVW + K+C A L +H V ++ + G LLS RDK + +WD+ C +T+ ++ + PG + S + +T++ K+C S HF+T Sbjct: 131 TIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV--RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKY--IVSCADDKTLRIWDYKNKRCTKTLSAHEHFVT 384 HSP 2 Score: 92.8189 bits (229), Expect = 2.923e-18 Identity = 56/205 (27.32%), Postives = 91/205 (44.39%), Query Frame = 3 Query: 264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK 878 K + G +T + P ++ S+ I+VWD T R+ KGH ++ +G LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV T H V + DG+ + S+ D+ V +W + CK + +E V + P SA + + +T K Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKK 303 HSP 3 Score: 89.7373 bits (221), Expect = 2.474e-17 Identity = 53/214 (24.77%), Postives = 102/214 (47.66%), Query Frame = 3 Query: 210 ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP-------------DTDKS-----LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE 797 +C+ +I + D T+ G ++++A+ P+ + S+ + I++W+++T C++++ GH + + G L+A++ D+ V VW V C + H+ VV I + P +T KS L SGS D T+++WD+ C+ TL H + V + + G ++S DK + +WD ++ C T+ +E Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHE 380 HSP 4 Score: 78.5666 bits (192), Expect = 5.704e-14 Identity = 50/213 (23.47%), Postives = 93/213 (43.66%), Query Frame = 3 Query: 183 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG--PAIGMA---CHPS---------------GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 ++ + ++ + ++I + +++ T G + + + + D L+ SS + + +RVW ++T +C + H+ I A HP+ G L + D+ + +WDV G C GH V +L HP + S +DD T+R+WD K+C TL H VTS+ +++ D+ V +W+ R Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGG--KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: LIS1_MACFA (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22 Identity = 60/206 (29.13%), Postives = 97/206 (47.09%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH-----------------FSRVTSMAITSDGSA---LLSAGRDKVVNLWDLRDYSCKLTV 785 +I + D + T++G +D++ ++ KLL S I++WD +C+R+ GHD +A P+G L +A D+ + +W+V G+C F GH+ V + P+ D +L+ S S+D TVRVW + K+C A L +H S T G LLS RDK + +WD+ C +T+ Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 HSP 2 Score: 97.4413 bits (241), Expect = 1.187e-19 Identity = 58/205 (28.29%), Postives = 91/205 (44.39%), Query Frame = 3 Query: 264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK 878 K + G +T + P ++ S+ I+VWD T R+ KGH ++ SG LL + AD + +WD G C GH VSS+ P+ D L S S D T+++W++ CV T H V + DG+ + S D+ V +W + CK + +E V + P S++ S S + +T K Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--LVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303 HSP 3 Score: 78.5666 bits (192), Expect = 5.704e-14 Identity = 49/213 (23.00%), Postives = 92/213 (43.19%), Query Frame = 3 Query: 183 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD-----------------GPAIGMACHPSGG---LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 ++ + ++ + ++I + ++ T G + + + + D L+ S + + +RVW ++T +C + H+ A G SG L + D+ + +WDV G C GH V +LFH + + S +DD T+RVWD K+C+ TL+ H VTS+ +++ D+ V +W+ R Sbjct: 200 IMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 59/206 (28.64%), Postives = 97/206 (47.09%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH-----------------FSRVTSMAITSDGSA---LLSAGRDKVVNLWDLRDYSCKLTV 785 +I + D + T++G +D++ ++ KLL S I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L+ S S+D TVRVW + K+C A L +H S T G LLS RDK + +WD+ C +T+ Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 HSP 2 Score: 98.2117 bits (243), Expect = 6.956e-20 Identity = 58/205 (28.29%), Postives = 92/205 (44.88%), Query Frame = 3 Query: 264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIK 878 K + G +T + P ++ S+ I+VWD T R+ KGH ++ SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV T H V + DG+ + S D+ V +W + CK + +E V + P S++ S S + +T K Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303 HSP 3 Score: 78.5666 bits (192), Expect = 5.704e-14 Identity = 49/213 (23.00%), Postives = 92/213 (43.19%), Query Frame = 3 Query: 183 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD-----------------GPAIGMACHPSGG---LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 ++ + ++ + ++I + ++ T G + + + + D L+ S + + +RVW ++T +C + H+ A G SG L + D+ + +WDV G C GH V +LFH + + S +DD T+RVWD K+C+ TL+ H VTS+ +++ D+ V +W+ R Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 The following BLAST results are available for this feature:
BLAST of FC877825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877825 ID=FC877825; Name=FC877825; organism=Citrus clementina; type=EST; length=923bpback to top |