FC877825

Overview
NameFC877825
Unique NameFC877825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBB5_MOUSE (Guanine nucleotide-binding protein subunit beta-5 OS=Mus musculus GN=Gnb5 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.735e-16
Identity = 56/204 (27.45%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  255 ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS--GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--FSRVTSMAITSDGSALLSAGRDKVVNLWD-LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFS 851
            A+ K ++   ++ ++A + +  D  + ++       +WD+ + + L+S+ GH    + +   PS  G    + G D+K +VWD+  G C   F+ H+  V+S+ ++P  D     SGSDDAT R++DL A + VA   K       +S+  +  G  L +   D  +N+WD L+     +       V  +   P G+AF S S
Sbjct:  185 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD--AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 386          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.735e-16
Identity = 52/174 (29.89%), Postives = 76/174 (43.68%), Query Frame = 3
Query:  264 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTV 785
            K  +  G D      L      + S      ++VW     KCLR+  GH G     +   SG ++ +   DR + VWD+D G C H  +GH   V  +  H     S + SGS DAT+RVWD+    C+  L  H + V    +  DG  ++S   D +V +W      C  T+
Sbjct:  986 KPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV--WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH----GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAV--RCVQYDGKLIVSGAYDYMVKIWHPERQECLHTL 1151          

HSP 2 Score: 83.9593 bits (206), Expect = 1.358e-15
Identity = 52/207 (25.12%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  165 YGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTV 785
            + G  +V  SD +        ++ +    N     T+ G +  + +  +S +  ++ S    R ++VWD+ +  C+ + +GH      M  H  G  + +   D  + VWD++ G C H   GH   V  + +    D  L+ SG+ D  V++W    ++C+ TL  H +RV S+    DG  ++S   D  + +WD+   +CK T+
Sbjct: 1003 FSGNRIVSGSDDN--------TLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN--IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY----DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTL 1191          

HSP 3 Score: 80.8777 bits (198), Expect = 1.149e-14
Identity = 46/152 (30.26%), Postives = 80/152 (52.63%), Query Frame = 3
Query:  318 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761
            D KL+ S  +   +++W     +CL + +GH      +      GL   +G+ D  + VWDV+ G C H   GH+ + S +    +  +++L SG+ D+TV+VWD+   +C+ TL   +KH S VT +   S    ++++  D  V LWD++
Sbjct: 1124 DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD---GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM----ELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNS--RFVVTSSDDGTVKLWDVK 1266          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: COPB2_DROME (Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.735e-16
Identity = 46/168 (27.38%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  270 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL-KCLRSWKGHDGPAIGMACHPS-GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDY 767
            + E  SD +  +A+ P   L+ +S     I++W+   +  C R ++GH    + +  +P      A+A  DR V VW +   F     +GH+  V+ + ++   DK  L SG+DD  V++WD   K CV TL+ H   ++++    +   +L+   D  V +W    Y
Sbjct:   94 SFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTY 261          

HSP 2 Score: 73.559 bits (179), Expect = 1.835e-12
Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  330 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF-CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSA--LLSAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 824
            + +     +IRV++ +TL+ + S++ H      +A HP+  L+ T+  D  + +W+ +  + C   F+GH   V  I+F+P  D +   S S D TV+VW L +     TL+ H   V  +     G    L+S   D++V +WD ++ +C  T+  + + + AVC  P
Sbjct:   72 ILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNP-KDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHP 239          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 49/176 (27.84%), Postives = 81/176 (46.02%), Query Frame = 3
Query:  243 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK--GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRD 764
            D++    +  + G S  ++  ALS D     S+   + IR+WDL   +C   + GH    + ++  P    + +   D+ + +W++ G  C +     GH   VS + F P+ D     S   D  V+VWDL       +   H   V+++ I+ DGS   S GRD  + LWDL +
Sbjct:   49 DVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGN-CKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNE 223          

HSP 2 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 58/201 (28.86%), Postives = 97/201 (48.26%), Query Frame = 3
Query:  261 IKSTIEGGSDTITALALSPDDK-LLFSSGHSREIRVW-----DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK-KCVATLDKHFSRVTSMAITS--DGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGS 833
            +++T+EG S  +T+L+ +P++  +L S    + I +W     D++     R   GH       A         +A  D+ + +WD++ G CTH F GH   V S+   PD  +  + SGS D T+++W+++   K   T   H   V+ +  +   D    +SAG DK V +WDL  +S + +   +   V AV   P GS
Sbjct:    7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQ--VVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGS 205          

HSP 3 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 51/183 (27.87%), Postives = 86/183 (46.99%), Query Frame = 3
Query:  246 LSNASIKSTIEGGSDTITALALSPD-DKLLF-SSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV---------TSMAITSDGSALLSAGRDKVVNLWDL 758
            + N     T  G SD ++ +  SP+ D L F S+G  + ++VWDL T     S  GH G    +   P G L A+ G D  +++WD++    TH Y    K  +++++F P+       +GS   ++R++DL  ++ V  L   F  V          S+  + DG  L S   D ++ +W +
Sbjct:  135 IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNES--THLYSLEAKANINALVFSPNRYWLCAATGS---SIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQV 312          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBB5_TAMST (Guanine nucleotide-binding protein subunit beta-5 OS=Tamias striatus GN=GNB5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 55/204 (26.96%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  255 ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS--GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--FSRVTSMAITSDGSALLSAGRDKVVNLWD-LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFS 851
            A+ K ++   ++ ++A + +  D  + ++       +WD+ + + L+S+ GH    + +   PS  G    + G D+K +VWD+  G C   F+ H+  ++S+ ++P  D     SGSDDAT R++DL A + VA   K       +S+  +  G  L +   D  +N+WD L+     +       V  +   P G+AF S S
Sbjct:  143 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD--AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 344          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBB5_RABIT (Guanine nucleotide-binding protein subunit beta-5 OS=Oryctolagus cuniculus GN=GNB5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 55/204 (26.96%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  255 ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS--GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--FSRVTSMAITSDGSALLSAGRDKVVNLWD-LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFS 851
            A+ K ++   ++ ++A + +  D  + ++       +WD+ + + L+S+ GH    + +   PS  G    + G D+K +VWD+  G C   F+ H+  ++S+ ++P  D     SGSDDAT R++DL A + VA   K       +S+  +  G  L +   D  +N+WD L+     +       V  +   P G+AF S S
Sbjct:  143 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD--AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGS 344          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBB5_PONAB (Guanine nucleotide-binding protein subunit beta-5 OS=Pongo abelii GN=GNB5 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 55/204 (26.96%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  255 ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS--GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--FSRVTSMAITSDGSALLSAGRDKVVNLWD-LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFS 851
            A+ K ++   ++ ++A + +  D  + ++       +WD+ + + L+S+ GH    + +   PS  G    + G D+K +VWD+  G C   F+ H+  ++S+ ++P  D     SGSDDAT R++DL A + VA   K       +S+  +  G  L +   D  +N+WD L+     +       V  +   P G+AF S S
Sbjct:  143 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD--AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 344          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: GBB5_HUMAN (Guanine nucleotide-binding protein subunit beta-5 OS=Homo sapiens GN=GNB5 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 55/204 (26.96%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  255 ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS--GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH--FSRVTSMAITSDGSALLSAGRDKVVNLWD-LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFS 851
            A+ K ++   ++ ++A + +  D  + ++       +WD+ + + L+S+ GH    + +   PS  G    + G D+K +VWD+  G C   F+ H+  ++S+ ++P  D     SGSDDAT R++DL A + VA   K       +S+  +  G  L +   D  +N+WD L+     +       V  +   P G+AF S S
Sbjct:  185 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGD--AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 386          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: WDR48_MACFA (WD repeat-containing protein 48 OS=Macaca fascicularis GN=WDR48 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 61/241 (25.31%), Postives = 112/241 (46.47%), Query Frame = 3
Query:  201 SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLR---------SWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRD-----YSCKLTVPTYEM-VEAVCAIPPGSAFDSFSSSYNQQTIK 878
            + I+ +   ++ + +       ST+    D + ALA + D +L+ S+G  R+I +WD++TL  L          S  G+      +A +  G ++ +   ++ + VWD          KGH   V ++L + D  + L  SGS D T+R+W L  ++C+AT   H   V ++ +    + + S GRD+ +   DLR+       C+   P  +M ++     PP     +  S+ N+ T+K
Sbjct:   89 TLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCL--SGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327          

HSP 2 Score: 73.1738 bits (178), Expect = 2.396e-12
Identity = 56/226 (24.78%), Postives = 96/226 (42.48%), Query Frame = 3
Query:  267 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV---------DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIKKKCRSLENHFITV 917
            +++E  +D +  + L  + K L S+     ++VW+     C+ + + H      +A      L+A+AG DR++ +WDV         +    T    G+K  + S+    +   +++ SGS +  +RVWD      +  L  H   V ++ +  DG+  LS   D  + LW L    C  T   ++  E V A+    AF    S    + I   C  L N  I V
Sbjct:   69 ASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAM--NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD--EGVWALQVNDAFTHVYSGGRDRKI--YCTDLRNPDIRV 288          
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: WDR48_HUMAN (WD repeat-containing protein 48 OS=Homo sapiens GN=WDR48 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 61/241 (25.31%), Postives = 112/241 (46.47%), Query Frame = 3
Query:  201 SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLR---------SWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRD-----YSCKLTVPTYEM-VEAVCAIPPGSAFDSFSSSYNQQTIK 878
            + I+ +   ++ + +       ST+    D + ALA + D +L+ S+G  R+I +WD++TL  L          S  G+      +A +  G ++ +   ++ + VWD          KGH   V ++L + D  + L  SGS D T+R+W L  ++C+AT   H   V ++ +    + + S GRD+ +   DLR+       C+   P  +M ++     PP     +  S+ N+ T+K
Sbjct:   89 TLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCL--SGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLK 327          

HSP 2 Score: 73.1738 bits (178), Expect = 2.396e-12
Identity = 56/226 (24.78%), Postives = 96/226 (42.48%), Query Frame = 3
Query:  267 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV---------DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIKKKCRSLENHFITV 917
            +++E  +D +  + L  + K L S+     ++VW+     C+ + + H      +A      L+A+AG DR++ +WDV         +    T    G+K  + S+    +   +++ SGS +  +RVWD      +  L  H   V ++ +  DG+  LS   D  + LW L    C  T   ++  E V A+    AF    S    + I   C  L N  I V
Sbjct:   69 ASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAM--NQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD--EGVWALQVNDAFTHVYSGGRDRKI--YCTDLRNPDIRV 288          
The following BLAST results are available for this feature:
BLAST of FC877825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
GBB5_MOUSE2.735e-1627.45Guanine nucleotide-binding protein subunit beta-5 ... [more]
FBXW7_DROME2.735e-1629.89F-box/WD repeat-containing protein 7 OS=Drosophila... [more]
COPB2_DROME2.735e-1627.38Coatomer subunit beta' OS=Drosophila melanogaster ... [more]
GBLP_SCHPO3.573e-1627.84Guanine nucleotide-binding protein subunit beta-li... [more]
GBB5_TAMST3.573e-1626.96Guanine nucleotide-binding protein subunit beta-5 ... [more]
GBB5_RABIT3.573e-1626.96Guanine nucleotide-binding protein subunit beta-5 ... [more]
GBB5_PONAB3.573e-1626.96Guanine nucleotide-binding protein subunit beta-5 ... [more]
GBB5_HUMAN3.573e-1626.96Guanine nucleotide-binding protein subunit beta-5 ... [more]
WDR48_MACFA4.666e-1625.31WD repeat-containing protein 48 OS=Macaca fascicul... [more]
WDR48_HUMAN4.666e-1625.31WD repeat-containing protein 48 OS=Homo sapiens GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA65DB04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877825 ID=FC877825; Name=FC877825; organism=Citrus clementina; type=EST; length=923bp
CCACAGGCTCATTGATTCGCAGGTCACTGTCGCTCTCCTCGTTACAGGAA
AATCCGGGTTTCAGTCCTGACCCGATAAAAGAGTAATCTTGAGTTTACGG
GTCCGCAATGGCATCCCTACCACTAAAGAAGAGCTACGGATGCGAACCTG
TCTTACAACAGTTCTACGGCGGTGGGCCGTTGGTGGTTTCATCGGACGGC
TCATTCATCGCGTGTGCGTGCGGCGAGTCTATCAACATTGTGGACTTATC
AAATGCCTCCATAAAGTCAACAATTGAAGGCGGGTCGGATACAATCACGG
CCTTGGCCCTTAGTCCCGACGATAAGCTGCTCTTCTCTTCTGGTCACAGT
CGGGAAATTAGGGTTTGGGATTTATCAACACTAAAATGTTTGCGCTCCTG
GAAGGGCCATGACGGTCCTGCAATTGGAATGGCATGTCACCCATCCGGTG
GATTGCTTGCTACTGCAGGAGCTGATAGGAAAGTTCTTGTTTGGGATGTC
GATGGTGGCTTTTGCACTCATTACTTCAAAGGTCATAAGGGAGTTGTCAG
TAGTATCTTGTTTCATCCTGACACGGATAAATCTCTTCTTTTCTCTGGTA
GTGATGATGCAACTGTGCGAGTTTGGGATCTTTTAGCCAAGAAATGTGTT
GCAACTTTGGATAAGCATTTCTCAAGAGTTACTTCTATGGCTATAACTAG
TGATGGATCGGCATTGCTCAGTGCTGGAAGAGATAAGGTTGTAAACTTGT
GGGACCTTCGTGACTACAGTTGCAAGTTGACTGTGCCAACATATGAGATG
GTTGAAGCTGTGTGTGCCATTCCTCCTGGGAGTGCTTTTGATTCATTTTC
TAGTTCATACAATCAGCAGACTATAAAGAAAAAATGCAGGTCACTAGAAA
ATCATTTCATCACTGTCGGTGAA
back to top