FC877825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: SMU1_MOUSE (WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 48/177 (27.12%), Postives = 73/177 (41.24%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--------DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLT 782 G + SPD + L + I VW+ +T K + K D + M +LAT D K+ VW + G C F + H V+ + F D+ S + S S D T+R+ L + K + H S V T DG ++SA D V +W+++ C T Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDS--SQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: SMU1_HUMAN (WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 48/177 (27.12%), Postives = 73/177 (41.24%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--------DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLT 782 G + SPD + L + I VW+ +T K + K D + M +LAT D K+ VW + G C F + H V+ + F D+ S + S S D T+R+ L + K + H S V T DG ++SA D V +W+++ C T Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDS--SQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: SMU1_CRIGR (WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 48/177 (27.12%), Postives = 73/177 (41.24%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--------DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLT 782 G + SPD + L + I VW+ +T K + K D + M +LAT D K+ VW + G C F + H V+ + F D+ S + S S D T+R+ L + K + H S V T DG ++SA D V +W+++ C T Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDS--SQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: SMU1_BOVIN (WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 48/177 (27.12%), Postives = 73/177 (41.24%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--------DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLT 782 G + SPD + L + I VW+ +T K + K D + M +LAT D K+ VW + G C F + H V+ + F D+ S + S S D T+R+ L + K + H S V T DG ++SA D V +W+++ C T Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDS--SQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: CDC20_PIG (Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 48/169 (28.40%), Postives = 79/169 (46.75%), Query Frame = 3 Query: 267 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKC----LRSWKGHDGPAIGMA-CHPSGGLLATAG--ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLW 752 +T+ G S + L +PD + L S G+ + VW + + L+++ H G +A C +LAT G +DR + +W+V G C H V S IL+ P + + G + +W VA L H +RV S+ ++ DG+ + SA D+ + LW Sbjct: 303 ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCS-ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLW 470
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: WSB2_MOUSE (WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 49/160 (30.63%), Postives = 74/160 (46.25%), Query Frame = 3 Query: 399 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK-KCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTI 875 W H A ++C +LAT D ++ +W+V G GH+ VV + F P + +L S S D T+R+WDL K + L H V +I+ D S L SA +K V LW +R Y+ + ++ C P SA ++SY+ I Sbjct: 111 WARHHPQAPDVSCL----ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP-SGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSAL-LVTASYDTSVI 264
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: SMU1_XENTR (WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis GN=smu1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 49/177 (27.68%), Postives = 72/177 (40.68%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--------DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLT 782 G + SPD + L + I VW+ +T K + K D + M +LAT D K+ VW + G C F + H V+ + F D S + S S D T+RV L + K + H S V T DG ++SA D V +W+++ C T Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDC--SQILSASFDQTIRVHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: CDC20_RAT (Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 48/169 (28.40%), Postives = 78/169 (46.15%), Query Frame = 3 Query: 267 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKC----LRSWKGHDGPAIGMA-CHPSGGLLATAG--ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLW 752 +T+ G S + L +PD + L S G+ + VW + L+++ H G +A C +LAT G +DR + +W+V G C H V S IL+ P + + G + +W VA L H +RV S+ ++ DG+ + SA D+ + LW Sbjct: 303 ATLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCS-ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLW 470
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: YN19_SCHPO (Uncharacterized WD repeat-containing protein C577.09 OS=Schizosaccharomyces pombe GN=SPBC577.09 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 70/272 (25.74%), Postives = 106/272 (38.97%), Query Frame = 3 Query: 207 IACACGESINIVDLSNASIKSTIEGGSDTITALALSP--------------DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP--SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-LAKKCVATLD-------------KHFSRVTSMAITSDGSALLSAGRDKVVNLWD-------LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFSSSYNQQTIKKKCRSLENHFI 911 ++ SIN+ DL N K + DT+ A+ D+ + SS ++VWD+STL+ ++ D A P S L+ATA + + D+ G TH GH G V ++ + P ++ +L SGS D T R+WD+ A +D H+ V +A TSD L S G D + +W+ LR++ + T C I P D F N LE F+ Sbjct: 64 VSGGANSSINVWDLQNIDQKEDEDLILDTLNAVPARTSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMED-MIYSHAWSPIASHCLIATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCP-KNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHPCMIQPSMDSDVFVLFPNDDGSLALLNLLEGSFV 333
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: SMU1_CHICK (WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 48/177 (27.12%), Postives = 73/177 (41.24%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--------DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLT 782 G + SPD + L + I VW+ +T K + K D + M +LAT D K+ VW + G C F + H V+ + F D+ S + S S D T+R+ L + K + H S V T DG ++SA D V +W+++ C T Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDS--SQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNT 386 The following BLAST results are available for this feature:
BLAST of FC877825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877825 ID=FC877825; Name=FC877825; organism=Citrus clementina; type=EST; length=923bpback to top |