FC877825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18 Identity = 65/225 (28.89%), Postives = 107/225 (47.56%), Query Frame = 3 Query: 159 QFYGGGPLVV---SSDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSP--------DDKLLFSSGHS-REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTY 794 Q G P+ + S++G+ F + + G + + + N S G +D ++ L P ++L ++G + + +W S L +GH +A HPSG L +A D +WDV G +GH + SI PD SL+ SG +DA R+WDL + K + LD+H ++ +MA + +G L ++ D V +WDLR S T+P + Sbjct: 168 QIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDG--SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAH 390 HSP 2 Score: 78.9518 bits (193), Expect = 4.367e-14 Identity = 45/159 (28.30%), Postives = 76/159 (47.80%), Query Frame = 3 Query: 276 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLW 752 EG S+ I ++A PD L+ S G+ R+WDL + K + H + MA P+G LAT+ AD V +WD+ H H +VS + + + + D V++W+ L + ++ H +V M++ G +S+G D+ + LW Sbjct: 304 EGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKV--MSVDGYGDRFISSGYDRTIKLW 460
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18 Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTV 785 ++ ++D + + ++ G + + A +P+ LL S IR+W L T C+ +++GH P + P G + D+ +W D F GH V + FHP++ + + +GS D TVR+WD + + V + H V+S+A ++ G L S D + +WDL + S T+ Sbjct: 431 NVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNS--NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTL 614 HSP 2 Score: 90.5077 bits (223), Expect = 1.450e-17 Identity = 56/183 (30.60%), Postives = 85/183 (46.45%), Query Frame = 3 Query: 207 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWD 755 ++C+ +I + L S T G + + +P S + + R+W + + LR + GH + HP+ +AT +DR V +WD G GHKG VSS+ F L SGS D + +WDL V TL +H S VT++ + DG+ L +AG D + LWD Sbjct: 466 LSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAF--SACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18 Identity = 55/216 (25.46%), Postives = 94/216 (43.52%), Query Frame = 3 Query: 126 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDY 767 K++Y + + L + S + GE +N+ + + ++ G S I ++ + L+ + S I++WDL K +R+ GH I + HP G A+ D + +WD+ C H +KGH V+ + F P D + SG +D V+VWDL A K + H ++ S+ L + D+ V WDL + Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP--DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217 HSP 2 Score: 84.3445 bits (207), Expect = 1.039e-15 Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 3 Query: 186 VSSDGSFIACACGES---INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALL 719 V+ D S + A G + I + DL A I T+ G ++ P + S +++WD+ C+ ++KGH + P G + + G D V VWD+ G FK H+G + S+ FHP + LL +GS D TV+ WDL + + + + V ++ DG +L Sbjct: 65 VTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP--HEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.111e-17 Identity = 52/163 (31.90%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 273 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT---LDKHFSRVTSMAITSDGSALLSAGRDKVVNLW 752 + G + + SPD +L+ SS IR+WD++ KCL KGH ++ P LA+ G D++ +VW+V G H GH + S F P +D L +GS D+TV +WDL A V + L+ H ++ + ++ G L S DK + +W Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS--LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVW 223 HSP 2 Score: 84.7297 bits (208), Expect = 7.959e-16 Identity = 46/156 (29.49%), Postives = 74/156 (47.44%), Query Frame = 3 Query: 294 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 + A SPD + L ++ + VW + + L GH GP P G L+A++ +D + +WDV C H KGH+ V ++ F PD+ + L SG D VW++ + + V L H + S + +L + D V++WDLR Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ--LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182 HSP 3 Score: 82.8037 bits (203), Expect = 3.024e-15 Identity = 60/217 (27.65%), Postives = 92/217 (42.40%), Query Frame = 3 Query: 189 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG---FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 827 S DG IA + + SI + D++ + ++G ++ ++ SPD K L S G + VW++ + + + GH P+ LAT D V +WD+ H +GH G +S + + + LL SGS D T+ VW L H V S+A + D L SAG + V +WD C T+ V C P Sbjct: 77 SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCY---SASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTP 290 HSP 4 Score: 70.0922 bits (170), Expect = 2.029e-11 Identity = 41/124 (33.06%), Postives = 58/124 (46.77%), Query Frame = 3 Query: 390 LRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 +R + H G A P G L TA D V VW G GH+G V S F P D L+ S S D ++R+WD+ KC+ L H V +++ + D L S G DK +W+++ Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP--DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140 HSP 5 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 48/151 (31.79%), Postives = 67/151 (44.37%), Query Frame = 3 Query: 279 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSW---KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLS 722 G D+I + SP L + + +WDL + S+ +GH G I C+ + GLLA+ D+ + VW KGH V+S+ F PD K L S TV+VWD L KC+ TL + T DG L+S Sbjct: 150 GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN-ISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELK--LASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVS 297
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: TUP1_KLULA (General transcriptional corepressor TUP1 OS=Kluyveromyces lactis GN=TUP1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17 Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 3 Query: 294 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK-------HFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYS 770 I ++ SPD K L + + IR+WDL T K + + KGH+ + PSG L + DR V +WD+ G C+ G V+++ P K + +GS D TVRVWD V LD H V S+ T DG ++S D+ V LW+L S Sbjct: 409 IRSVCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDG-VTTVAVSPGEGK-FIAAGSLDRTVRVWDSDTGFLVERLDSENELGTGHRDSVYSVVFTRDGKGVVSGSLDRSVKLWNLNGLS 572 HSP 2 Score: 87.0409 bits (214), Expect = 1.604e-16 Identity = 63/206 (30.58%), Postives = 88/206 (42.72%), Query Frame = 3 Query: 189 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-------KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA-------KKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 S DG F+A + I I DL I T++G I +L P L S R +R+WDL+T C + DG G +A DR V VWD D GF GH+ V S++F D + SGS D +V++W+L +C T H V S+A T + +LS +D+ V WD + Sbjct: 415 SPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPGEGKFIAAGSLDRTVRVWDSDTGFLVERLDSENELGTGHRDSVYSVVF--TRDGKGVVSGSLDRSVKLWNLNGLSGQKSHAECEVTYTGHKDFVLSVATTQNDEYILSGSKDRGVLFWDTK 618
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17 Identity = 53/197 (26.90%), Postives = 97/197 (49.24%), Query Frame = 3 Query: 180 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD-GGFCTHYFKGHKGV-VSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 L S + +++ + D S+ I +T++G + +T++ P +L+FS+ IR+W + C++ + H+ G++ H +G L ++ D+ D+ G T G ++ FHPD L+F +G+ D+ +++WDL + VA H +TS+A + +G L +A D V LWDLR Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD---GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 53/203 (26.11%), Postives = 94/203 (46.31%), Query Frame = 3 Query: 192 SDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALS-PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE 797 S SFI + + + D ++ T+EG + + A+ + P + + + ++W T KC +++GH + +A +P L+AT D +WD+ G GH + S+ F+ D+ L +GS D TV VW++ + + + TL H ++S D S + +A DK LWD + C T+ +E Sbjct: 103 SGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDR--LITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHE 303 HSP 2 Score: 85.5001 bits (210), Expect = 4.666e-16 Identity = 53/196 (27.04%), Postives = 88/196 (44.90%), Query Frame = 3 Query: 270 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFSS 854 T G + I LA +P L+ + ++WD+ + + + GH I ++ + +G L T D V VW++ G H GH+G +SS F + D SL+ + S D + ++WD L KCVATL H V + S G + +A D ++ C + +E + +C G+ + SS Sbjct: 172 TFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQF--NWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASS 365 HSP 3 Score: 80.8777 bits (198), Expect = 1.149e-14 Identity = 39/156 (25.00%), Postives = 80/156 (51.28%), Query Frame = 3 Query: 294 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC-HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDL 758 +T +A + + + R +VWD ++ + L + +GH + +P G +AT D+ +W + G C H F+GH + + F+P + +L+ +GS D T ++WD+ + + TL H + + S++ + G L++ D V++W++ Sbjct: 95 LTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQS--TLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEI 248 HSP 4 Score: 80.1073 bits (196), Expect = 1.960e-14 Identity = 44/177 (24.86%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 243 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSC 773 D+ + T+ G + I +L+ + L + + VW++ + + + + GH G + L+ATA D+ +WD G C GH+ V + F D+ L+ + S D T RV+ ++KC+A L+ H ++ + + G+ +L+A DK LW+ C Sbjct: 205 DIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTF--DSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGEC 379 HSP 5 Score: 77.7962 bits (190), Expect = 9.729e-14 Identity = 39/175 (22.29%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 228 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLW 752 ++++ ++ + T+ G I++ + D L+ ++ + ++WD KC+ + GH+ + + +G L+ATA AD V+ C +GH+G +S I F+ ++ + + S D T R+W+ +C+ L H + S A +G+ +++ +D +W Sbjct: 242 TVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNR--ILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNTCRIW 414
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: WDR38_HUMAN (WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 64/240 (26.67%), Postives = 105/240 (43.75%), Query Frame = 3 Query: 189 SSDGSFIACA-CGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD---VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI-PPGSAFDSFSSSYNQQTIKKKCRS 893 S DG A A C ++ + D++ A ++G ++ ++ SPD + L S G + + +WD+ + + LR GH P+ LAT D V +WD V +GH +S + + + LL SGS D T+ +W + L H + V S+A + D L SAG ++V +WD C T+ V CA P G S ++ ++ I + +S Sbjct: 72 SPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCY---SASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVSGAADQTRRQISRTSKS 308 HSP 2 Score: 78.1814 bits (191), Expect = 7.449e-14 Identity = 46/156 (29.49%), Postives = 73/156 (46.79%), Query Frame = 3 Query: 294 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 + + A SPD ++L + + W+ + + L GH GP P G L A+A D V +WDV C KGH+ V ++ F PD+ + L SG D V +WD+ + + + L H + S + + L + D V++WDLR Sbjct: 24 VNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ--LASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLR 177 HSP 3 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 42/118 (35.59%), Postives = 53/118 (44.92%), Query Frame = 3 Query: 408 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 H G A P G +L T D V W+ G GH G V F P D L S S D TVR+WD+ KC+ L H V +++ + D L S G DK V LWD++ Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSP--DGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQ 135
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 53/197 (26.90%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 180 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD-GGFCTHYFKGHKGV-VSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 L S + +++ + D S I +T++G + +T++ P +L+FS+ IR+W + C++ + H+ G++ H +G L ++ D+ D+ G T G ++ FHPD L+F +G+ D+ +++WDL + VA H +TS+A + +G L +A D V LWDLR Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD---GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
BLAST of FC877825 vs. ExPASy Swiss-Prot
Match: PRP19_MOUSE (Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17 Identity = 53/197 (26.90%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 180 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD-GGFCTHYFKGHKGV-VSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSALLSAGRDKVVNLWDLR 761 L S + +++ + D S I +T++G + +T++ P +L+FS+ IR+W + C++ + H+ G++ H +G L ++ D+ D+ G T G ++ FHPD L+F +G+ D+ +++WDL + VA H +TS+A + +G L +A D V LWDLR Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPD---GLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422 The following BLAST results are available for this feature:
BLAST of FC877825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877825 ID=FC877825; Name=FC877825; organism=Citrus clementina; type=EST; length=923bpback to top |