FC877830

Overview
NameFC877830
Unique NameFC877830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10464 contig Ccv1_Contig10464:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28
Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 3 
Query:  339 DGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV----SSEYIKVPDYKSSSHTPK 842
            +G Y     E   ++T+ Y++   +G GTFGQV +CW R  KE+VAIKI++    Y     IE+ +L +L+  +      V+    F ++NH C+VFE L  +LYDFL++N +   P+  +R I +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  172 EGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 346
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28
Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 3 
Query:  339 DGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV----SSEYIKVPDYKSSSHTPK 842
            +G Y     E   ++T+ Y++   +G GTFGQV +CW R  KE+VAIKI++    Y     IE+ +L +L+  +      V+    F ++NH C+VFE L  +LYDFL++N +   P+  +R I +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  172 EGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 346
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.817e-28
Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 3 
Query:  339 DGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV----SSEYIKVPDYKSSSHTPK 842
            +G Y     E   ++T+ Y++   +G GTFGQV +CW R  KE+VAIKI++    Y     IE+ +L +L+  +      V+    F ++NH C+VFE L  +LYDFL++N +   P+  +R I +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  172 EGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 346
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.373e-28
Identity = 64/196 (32.65%), Postives = 109/196 (55.61%), Query Frame = 3 
Query:  330 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTY 914
            DD +G+Y     +++  RY+I   +G+G+FGQV+   D +    VAIKI+R  K++   A++E+ +L +L + D  G +  + + ++  +R H+CI FE +  +LY+ ++KNNY  F + L+R     +++C+  ++   +IH DLKPEN+LL                         +   SS+IKVIDFGS+ Y
Sbjct:  180 DDDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELIKKNNYNGFSMSLIRRFCNSIVKCLRLLYKENIIHCDLKPENILL-------------------------KQRGSSSIKVIDFGSSCY 350
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.286e-28
Identity = 62/177 (35.03%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:  333 DKDGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSSHTPK 842
            + +G Y     E   ++T+ Y++   +G GTFGQV++CW R   E+VAIKI++    Y     IE+ +L +L+         V+    F ++NH C+VFE L  +LYDFL++N +   P+  +R + +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  179 NSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSK 355
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.286e-28
Identity = 62/177 (35.03%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:  333 DKDGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSSHTPK 842
            + +G Y     E   ++T+ Y++   +G GTFGQV++CW R   E+VAIKI++    Y     IE+ +L +L+         V+    F ++NH C+VFE L  +LYDFL++N +   P+  +R + +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  179 NSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSK 355
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.286e-28
Identity = 62/177 (35.03%), Postives = 100/177 (56.50%), Query Frame = 3 
Query:  333 DKDGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE----YIKVPDYKSSSHTPK 842
            + +G Y     E   ++T+ Y++   +G GTFGQV++CW R   E+VAIKI++    Y     IE+ +L +L+         V+    F ++NH C+VFE L  +LYDFL++N +   P+  +R + +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  179 NSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQQVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSK 355
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK3_HUMAN (Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.017e-28
Identity = 65/175 (37.14%), Postives = 99/175 (56.57%), Query Frame = 3 
Query:  339 DGHYMFALGENLTSR---YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV----SSEYIKVPDYKSSSHTPK 842
            +G Y     E L S    Y++   +G GTFGQV++CW R   E+VAIKI++    Y     IE+ +L +L+  +      V+    F +RNH C+VFE L  +LYDFL++N +   P+ ++R I +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  179 EGDYQLVQHEVLCSMKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPILQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 353
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK3_RAT (Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.178e-27
Identity = 64/175 (36.57%), Postives = 99/175 (56.57%), Query Frame = 3 
Query:  339 DGHYMFALGENLTS---RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV----SSEYIKVPDYKSSSHTPK 842
            +G Y     E L S    Y++   +G GTFGQV++CW R   E+VAIKI++    Y     IE+ +L +L+  +      V+    F +RNH C+VFE L  +LYDFL++N +   P+ ++R + +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  179 EGDYQLVQHEVLCSVKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 353
[Close]
BLAST of FC877830 vs. ExPASy Swiss-Prot
Match: HIPK3_MOUSE (Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.178e-27
Identity = 64/175 (36.57%), Postives = 99/175 (56.57%), Query Frame = 3 
Query:  339 DGHYMFALGENLTSR---YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV----SSEYIKVPDYKSSSHTPK 842
            +G Y     E L S    Y++   +G GTFGQV++CW R   E+VAIKI++    Y     IE+ +L +L+  +      V+    F +RNH C+VFE L  +LYDFL++N +   P+ ++R + +Q+   +  +  L +IH DLKPEN++LV        +KV D+ S+SH  K
Sbjct:  179 EGDYQLVQHEVLCSMKNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 353
The following BLAST results are available for this feature:
BLAST of FC877830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
HIPK1_RAT1.817e-2836.57Homeodomain-interacting protein kinase 1 OS=Rattus... [more]
HIPK1_MOUSE1.817e-2836.57Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN1.817e-2836.57Homeodomain-interacting protein kinase 1 OS=Homo s... [more]
DYRK2_DROME2.373e-2832.65Dual specificity tyrosine-phosphorylation-regulate... [more]
HIPK2_MOUSE5.286e-2835.03Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]
HIPK2_MESAU5.286e-2835.03Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
HIPK2_HUMAN5.286e-2835.03Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
HIPK3_HUMAN9.017e-2837.14Homeodomain-interacting protein kinase 3 OS=Homo s... [more]
HIPK3_RAT1.178e-2736.57Homeodomain-interacting protein kinase 3 OS=Rattus... [more]
HIPK3_MOUSE1.178e-2736.57Homeodomain-interacting protein kinase 3 OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA53BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877830 ID=FC877830; Name=FC877830; organism=Citrus clementina; type=EST; length=920bp
AAAATTCATATCTTCGTTATTTTATTCGTTCGTTTCAATCGCATCAAGAT
CTCGATCTCTCTCTTATTTCCTCGCCGTGAGCTGCGATCATGGAGATGGA
GCGCGTGACGGAGTTTCCTTTTTCGAATCTGGATCGGCGTCCTCGTAAGC
GAGCGCGTTTGGGCTGGGACGTGCCTCAGGTACCGAAGGCTCAGGTAGGA
TTATTTTGTGGACAAGAGGTTGGGAATGTAACAAGCTTTGCACCTCCAAG
AGCTCCCTCAGACCATGTCACTAGTTCTTCTCTATTTGTAAAGGGAGTGG
CTCGAAATGGTTCTCCCCCATGGCGTGAGGATGACAAAGATGGCCATTAT
ATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATTCACAGCAA
AATGGGTGAAGGAACCTTCGGTCAGGTTTTGGAATGCTGGGATCGTGAGA
GGAAAGAAATGGTAGCCATTAAAATTGTTCGTGGGATCAAGAAATATCGT
GAGGCTGCTATGATAGAAATTGAAGTACTTCAACAACTTGCAAAACATGA
TAAAGGTGGCAACCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTA
ACCATATCTGTATTGTGTTTGAGAAGCTTGGATCTAGCTTATACGATTTT
CTACGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGAT
TGCCAGACAACTGTTGGAATGTATAGCATTTATGCATGATCTGTGTATGA
TACATACTGACTTAAAGCCTGAGAATGTTCTACTTGTTTCTTCTGAGTAT
ATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAAGATTCTTC
CTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGATTGATTTTG
GCAGCACAACTTATGAGCGC
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