FC877831

Overview
NameFC877831
Unique NameFC877831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length894
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12380 contig Ccv1_Contig12380:129..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.121e-50
Identity = 95/216 (43.98%), Postives = 136/216 (62.96%), Query Frame = 2
Query:  200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
            G  +L DP  NK   F   E             V+S E Q  +F+ + R  +          V L K+  +  L +RNE L+Y++L+D++++  P++YTPTVG  CQ Y  +FRRP+G++ S KDKG ++ ++ NWP +++ +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G+ P   LP+ LDVGTNNQKLL+D  Y+GL+Q R  GE+
Sbjct:   46 GHSLLRDPQHNKGLAFTEKERDAHFLRGLLPPVVLSQELQEKKFLTTLRQYQ----------VPLQKYMAMMDLQERNEKLFYKLLVDHVEELLPLVYTPTVGEGCQKYGSIFRRPQGLFISLKDKGRILELLRNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVCPSACLPITLDVGTNNQKLLDDEFYIGLKQKRATGEE 251          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.770e-50
Identity = 95/221 (42.99%), Postives = 136/221 (61.54%), Query Frame = 2
Query:  200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLL 862
            G  +L DP  NK   F   E              IS + Q  + M + R  +          + L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +F+RP+G+Y S K+KG+++ ++ NWP + + +IV+TDG RILGLGDLG QGIGIP+GKL +Y A  G+ P   LPV +DVGTNN++LL+D  Y+GLRQ R  G++   LL
Sbjct:   52 GYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQ----------LPLQKYTAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKVLDVLKNWPQKSIQVIVVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNEQLLKDEFYIGLRQRRATGQEYSELL 262          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.725e-50
Identity = 93/221 (42.08%), Postives = 136/221 (61.54%), Query Frame = 2
Query:  200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLL 862
            G  +L DP  NK   F   E             V+S + Q  + M + R             V L ++  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FR+P+G+Y S KDKG+++ ++ NWP + + +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G+ P   LP+ +DVGTNN++LL D  Y+GLRQ R  G++ + L+
Sbjct:  100 GYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYS----------VPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLRQRRATGKEYHELM 310          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.375e-49
Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 2
Query:  209 ILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLL 862
            IL +P  NK TGF   E             V S ++Q  R +  F S   N E          ++  LN L DRNETL+Y +L +N++   PIIYTPTVG  CQ +   FR  +GMYF+++DKG + +M+ NWPA+ VD+IV++DGSRILGLGDLG  G+GIP+GKL +YVA AG  P R LPV++D GTN +K LED+ YLG R PR+   + Y L+
Sbjct:    8 ILRNPSANKGTGFNNEEREKLGLKGLLPPKVESLQEQSDRALSQFTSFNTNLE----------RYIFLNCLRDRNETLFYYLLSNNLELMMPIIYTPTVGEACQKFGNEFRFAQGMYFASQDKGNIRAMMDNWPAEGVDIIVVSDGSRILGLGDLGTNGMGIPVGKLQLYVAGAGFCPTRTLPVIIDSGTNTKKYLEDKYYLGERHPRIPDSEYYPLV 215          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.063e-49
Identity = 99/219 (45.21%), Postives = 136/219 (62.10%), Query Frame = 2
Query:  191 HKRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
            H+RG  +  +P  NKD  F L E               S E Q  R +++F  L  + +          ++ +L  L DRNE L+YRVL  +I+ F PI+YTPTVGL CQ YS +FR+PRG++ +  D+G + S++  WP   +  IV+TDG RILGLGDLG  G+GIP+GKL +Y A  G+NPQ  LPV+LDVGT N++LL+D LY+GLRQ R+ G +
Sbjct:   12 HQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFD----------RYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSE 220          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.224e-49
Identity = 93/216 (43.06%), Postives = 134/216 (62.04%), Query Frame = 2
Query:  200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
            G  +L DP  NK   F   E             V + E Q  + M S R  +          V L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FRRP+G+Y S K+KG+++ ++ NWP +++ +IV+TDG RILGLGDLG QG+GIP+GKL +Y A  G+ P   LP+ +DVGTNN+KLL +  Y+GL+Q R  G++
Sbjct:   52 GYSLLRDPRHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQ----------VPLQKYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERRIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLANEFYIGLKQRRATGKE 257          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.593e-48
Identity = 98/231 (42.42%), Postives = 137/231 (59.31%), Query Frame = 2
Query:  194 KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLLMNSWELFT 886
            K+G ++L DP  NK   F L E              +  + Q    +++F  L  +          L ++ +L  L DRNE L+Y+VL  +I+ F PI+YTPTVGL CQ+Y   FRRPRG++ +  D+G + +M+ +WP   +  IV+TDG RILGLGDLG  G+GIP+GKL +Y A  G+ P + LPVMLDVGT+N+ LL+D LY+GLR  R+ G+    LL    E  T
Sbjct:    2 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSD----------LDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVT 222          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.593e-48
Identity = 102/227 (44.93%), Postives = 138/227 (60.79%), Query Frame = 2
Query:  194 KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKG--EMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLLMN 868
            KR  ++L +P  NK  GF L E              ++ EQQ  R +   R        QPN    LA++  L+ L DRNE L+YRV+ D++K+  PI+YTPTVGL CQN+  ++R+P+G+Y +  D    ++  ++ NW  + V  IV+TDG RILGLGDLG  GIGIP+GKL +YVA  G+ P+  LPV+LDVGTNN  LL D  Y+GLR  R+ G+D   LL N
Sbjct:   75 KRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLRE-------QPN---DLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDN 291          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.386e-48
Identity = 99/231 (42.86%), Postives = 135/231 (58.44%), Query Frame = 2
Query:  194 KRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLLMNSWELFT 886
            KRG ++L DP  NK   F L E              +  + Q    +++F  L  +          L ++ +L  L DRNE L+Y+VL  +I+ F PI+YTPTVGL CQ Y   FRRPRG++ +  D+G + +M+ +WP   +  IV+TDG RILGLGDLG  G+GIP+GKL +Y A  G+ P   LPVMLDVGT+N+ LL+D LY+GLR  R+ G+    LL    E  T
Sbjct:    2 KRGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSD----------LDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHECLPVMLDVGTDNEALLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVT 222          
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.776e-48
Identity = 96/216 (44.44%), Postives = 133/216 (61.57%), Query Frame = 2
Query:  200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
            G  +   P  NKD  F L E              IS + Q  R +++F  L  + +          ++ +L  L DRNE L+Y+VL+ +I+ F PI+YTPTVGL CQ YS  FR+PRG++ S  D+G + S++  WP   +  +V+TDG RILGLGDLG  G+GIP+GKL +Y A  G+NPQ  LPV+LDVGT N++LL+D LY+GLRQ R+ G +
Sbjct:    1 GYGLTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFD----------RYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPE 206          
The following BLAST results are available for this feature:
BLAST of FC877831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_MESCR2.121e-5043.98NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_POPTR2.770e-5042.99NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_ORYSJ4.725e-5042.08NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_DICDI1.375e-4947.25NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAOX_HUMAN3.063e-4945.21NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOX_VITVI5.224e-4943.06NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_COLLI2.593e-4842.42NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOM_ASCSU2.593e-4844.93NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAOX_ANAPL3.386e-4842.86NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_PIG5.776e-4844.44NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99CF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877831 ID=FC877831; Name=FC877831; organism=Citrus clementina; type=EST; length=894bp
CAAAATCTAAAACGATGCAATTAAAGTGGACTTTATAGTTTGTGTTATTG
TTTTAGATCTTTTCCGGAAAGCCTTTTTGTTCTTTGGCTTAGATCTTGAC
GCGGAAATGTGGAATCTTGCTCGAGTTGCCGCGTCCGTATTAAGCCGATC
GAGGCGATTCTCGACGGCGATTCCTGGTCCCTGTATGGTTCACAAACGCG
GCACTGATATTCTTCATGATCCCTGGTTCAACAAGGATACTGGCTTTCCT
TTGACTGAAAGAGACCGACTGGGGCTCCGTGGCCTCCTCCCACCCCGCGT
GATATCATTCGAGCAGCAATATGCTCGTTTCATGGAATCATTCCGATCAT
TAGAGAAAAATACTGAGGGTCAACCAAATAAAGTTGTATCATTAGCAAAG
TGGAGGATCTTGAACAGACTGCATGACAGGAATGAAACATTATACTACAG
AGTCCTGATTGATAACATCAAAGATTTTGCTCCAATTATATACACTCCAA
CTGTTGGATTGGTTTGTCAGAATTATTCAGGTTTGTTTAGACGTCCCCGT
GGAATGTATTTCAGTGCAAAGGATAAGGGGGAGATGATGTCTATGATCTA
CAATTGGCCTGCTCAACAGGTAGATATGATAGTCCTAACGGATGGAAGTC
GTATTCTTGGCTTAGGCGACCTTGGAGTTCAGGGAATTGGAATTCCTATT
GGAAAGCTGGATGTGTATGTGGCTGCTGCAGGCATCAATCCACAGAGAAT
TCTCCCGGTTATGCTTGATGTTGGCACTAACAATCAAAAGCTGCTTGAAG
ACCGTCTATATTTGGGACTCCGACAACCTAGGCTAGAAGGAGAAGATATC
TATCNATTGTTGATGAATTCATGGGAGCTGTTCACGCACGTTGG
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