FC877831
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.956e-42 Identity = 90/216 (41.67%), Postives = 128/216 (59.26%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
G IL P NK + F E + + E+Q +R + FRS + L K L + D NETL+YR++ ++I + PIIYTPTVGL C+ +S +RR RG++ S +K + ++ N Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y + GI+P LP+ LDVGT+N +LLED +Y+G R PR+ GE+
Sbjct: 14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEE 219 HSP 2 Score: 24.2534 bits (51), Expect = 1.956e-42 Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y ++ FM AVH RW
Sbjct: 220 YAEFIEAFMQAVHVRW 235
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.956e-42 Identity = 90/216 (41.67%), Postives = 128/216 (59.26%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
G IL P NK + F E + + E+Q +R + FRS + L K L + D NETL+YR++ ++I + PIIYTPTVGL C+ +S +RR RG++ S +K + ++ N Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y + GI+P LP+ LDVGT+N +LLED +Y+G R PR+ GE+
Sbjct: 14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEE 219 HSP 2 Score: 24.2534 bits (51), Expect = 1.956e-42 Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y ++ FM AVH RW
Sbjct: 220 YAEFIEAFMQAVHVRW 235
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.956e-42 Identity = 90/216 (41.67%), Postives = 128/216 (59.26%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
G IL P NK + F E + + E+Q +R + FRS + L K L + D NETL+YR++ ++I + PIIYTPTVGL C+ +S +RR RG++ S +K + ++ N Q+V +IV+TDG RILGLGD G+ G+GIPIGKL +Y + GI+P LP+ LDVGT+N +LLED +Y+G R PR+ GE+
Sbjct: 14 GPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEE 219 HSP 2 Score: 24.2534 bits (51), Expect = 1.956e-42 Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y ++ FM AVH RW
Sbjct: 220 YAEFIEAFMQAVHVRW 235
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.736e-42 Identity = 87/228 (38.16%), Postives = 131/228 (57.46%), Query Frame = 2
Query: 179 PCMVHKRGTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIYXLL 862
P + G +L P NK + F E + + E+Q R + + + + + K L + D NETL+YR++ D++++ PIIYTPTVG CQ +S ++RR RG++ S D+ + ++ N + V +IV+TDG RILGLGD G+ G+GIPIGKL +Y A GI+P LP+ +DVGTNNQ+LL D +Y+G RQPR+ G++ Y +
Sbjct: 11 PLYIPYAGYTLLELPLLNKGSAFTQEERSHFNLHGLIPHVIETIEEQSQRSYQQYGAFNDD----------INKHIYLRNIQDTNETLFYRLINDHLEEMMPIIYTPTVGEACQRFSDIYRRHRGIFISYPDREHIDDILQNVSKRNVKVIVITDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPITIDVGTNNQQLLNDPIYMGWRQPRISGDEYYEFI 228
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.640e-42 Identity = 86/216 (39.81%), Postives = 126/216 (58.33%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
G +L + NK + F E + S +Q R +++ + + K L + D NETLYYR++ ++I++ PIIYTPTVG C+ +S ++RR RG++ DKG ++ ++ N Q V +IV+TDG RILGLGD G+ G+GIPIGKL +Y A GINP LP++LDVGTNN +LL D +Y+G R PR+ G++
Sbjct: 14 GPTLLENALLNKGSAFSPEERQNFSLMGLLPAAIESITEQEERAYSQYQTFNDDMD----------KHIYLRNIQDTNETLYYRLIDNHIEEMMPIIYTPTVGAACEQFSNIYRRGRGLFLGYPDKGNIVDILNNAARQDVKIIVITDGERILGLGDQGIGGMGIPIGKLALYTACGGINPANTLPIVLDVGTNNTQLLSDPMYMGWRHPRITGQE 219 HSP 2 Score: 21.557 bits (44), Expect = 5.640e-42 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 1
Query: 841 RRYLSIVDEFMGAVHARW 894
+ Y V+EF+ AV +RW
Sbjct: 218 QEYDDFVEEFIQAVKSRW 235
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 7.348e-42 Identity = 90/216 (41.67%), Postives = 126/216 (58.33%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
G IL P NK + F E + + E+Q +R + FRS + L K L + D NETL+YR++ +NI + PIIYTPTVGL C+ +S +RR RG++ S +K + ++ N +V +IV+TDG RILGLGD G+ G+GIPIGKL +Y + GI+P LP+ LDVGT+N LLED +Y+G R PR+ GE+
Sbjct: 14 GPAILEAPLINKGSAFTEEERIFFNLEGLLPYAIETIEEQASRAYDQFRSFNND----------LDKHIYLRNIQDTNETLFYRLVQNNIAEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRHKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRHPRIGGEE 219 HSP 2 Score: 23.483 bits (49), Expect = 7.348e-42 Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y ++ FM AVH RW
Sbjct: 220 YSEFIEAFMEAVHRRW 235
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.248e-41 Identity = 89/216 (41.20%), Postives = 126/216 (58.33%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGED 847
G IL P NK + F E + + E+Q AR F + + L K L + D NETL+YR++ +NI + PIIYTPTVGL C+ +S +RR RG++ S +K + ++ N +V +IV+TDG RILGLGD G+ G+GIPIGKL +Y + GI+P LP+ LDVGT+NQ+LL+D +Y+G R R+EG+D
Sbjct: 14 GPAILEAPLINKGSAFSEEERIFFNLEGLLPYVIETIEEQAARAYAQFSNFSND----------LDKHIYLRNIQDTNETLFYRLVRNNITEMMPIIYTPTVGLACERFSKNYRRNRGLFISYSNKDRIDDILNNSTRHKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNQELLDDPMYMGWRHRRIEGQD 219 HSP 2 Score: 24.2534 bits (51), Expect = 1.248e-41 Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y V+ FM AVH RW
Sbjct: 220 YADFVEAFMEAVHRRW 235
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.625e-41 Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIY 853
G +L P NK + F + E V S E+Q R ++ + + K L + D NETL+YR++ +++ + P+IYTPTVG C+ +S ++RR RG++ S +++ M ++ N P + +IV+TDG RILGLGD G+ G+GIPIGKL +Y A GI+P LPV+LDVGTNNQ+LL D LY+G R PR+ ++ Y
Sbjct: 17 GPVLLEFPLLNKGSAFSIEERRNFNLLGLLPEVVESIEEQAERAWIQYQGFKTEID----------KHIYLRNIQDTNETLFYRLVQNHLDEMMPVIYTPTVGAACERFSEIYRRARGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYY 224 HSP 2 Score: 23.0978 bits (48), Expect = 1.625e-41 Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y VDEF+ AV RW
Sbjct: 223 YYEFVDEFIQAVKQRW 238
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.625e-41 Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIY 853
G +L P NK + F + E V S E+Q R ++ + + K L + D NETL+YR++ +++++ P+IYTPTVG C+ +S ++RR RG++ S ++ M ++ N P + +IV+TDG RILGLGD G+ G+GIPIGKL +Y A GI+P LPV+LDVGTNNQ+LL D LY+G R PR+ ++ Y
Sbjct: 17 GPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEID----------KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYY 224 HSP 2 Score: 23.483 bits (49), Expect = 1.625e-41 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y + VDEF+ AV RW
Sbjct: 223 YYAFVDEFIQAVKQRW 238
BLAST of FC877831 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.625e-41 Identity = 86/218 (39.45%), Postives = 127/218 (58.26%), Query Frame = 2
Query: 200 GTDILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEDIY 853
G +L P NK + F + E V S E+Q R ++ + + K L + D NETL+YR++ +++++ P+IYTPTVG C+ +S ++RR RG++ S ++ M ++ N P + +IV+TDG RILGLGD G+ G+GIPIGKL +Y A GI+P LPV+LDVGTNNQ+LL D LY+G R PR+ ++ Y
Sbjct: 17 GPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEID----------KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYY 224 HSP 2 Score: 23.483 bits (49), Expect = 1.625e-41 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 1
Query: 847 YLSIVDEFMGAVHARW 894
Y + VDEF+ AV RW
Sbjct: 223 YYAFVDEFIQAVKQRW 238 The following BLAST results are available for this feature:
BLAST of FC877831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877831 ID=FC877831; Name=FC877831; organism=Citrus clementina; type=EST; length=894bpback to top |