FC877835

Overview
NameFC877835
Unique NameFC877835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length936
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.129e-49
Identity = 113/299 (37.79%), Postives = 162/299 (54.18%), Query Frame = 1
Query:   37 IAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQ 933
            ++E A +LK+ ++  +++Q+TCLDGF++     K  E + +       + SNA+ M+  ++    G D    YS +RRL  +   P W++ G RRLL              GSG + T        P  ++  ++I +KAG Y+E V V K+   +              S N  DG  T+N+AT  V G  F+A+DI F+NTAG  KHQAVALRV +D + FY C M  +QDTLYV S RQFY  C I+GT+DF+FG    VFQNC +  R P   Q+ +VTA GR+  N  + +V Q
Sbjct:   30 LSEYAFDLKVWLTGTLSHQQTCLDGFANTTT--KAGETMTKVLKTSMELSSNAIDMMDAVSRILKGFD-TSQYSVSRRLLSDDGIPSWVNDGHRRLLAGGNVQPNAVVAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQ 325          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.129e-49
Identity = 120/304 (39.47%), Postives = 163/304 (53.62%), Query Frame = 1
Query:   34 SIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDG--DIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXX---GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            S  +   +L+  +SA M+ QETCLDGF       +++  +   Q+    + SN+LA+IK  T+    + K +  H      LD     P W+S  DRR+L+                GSG++ T        PE    RYII +K G Y E V V KKK NL              +++      TF +AT    G+GF+A+ + F+NTAG   HQAVA+RV SD S F  C    YQDTLY ++ RQ+Y SC+I GT+DFIFG+AAA+FQNC+I  R+  P Q+N VTAQGR D  Q TG V+
Sbjct:  203 SFEKVVPDLESWLSAVMSYQETCLDGFEEGNLKSEVKTSVNSSQV----LTSNSLALIKTFTENLSPVMKVVERHL-----LDGI---PSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVV 494          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.475e-49
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 1
Query:  436 YIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            ++I  +AG Y E V +  KK N+M             + + +DG TT+NS+T AVVGD F+A D+TF+NTAGP KHQAVA+R  +D S FYRC    YQDTLYVHSLRQFY  C I GT+DFIFGNAAA+FQNC+I+AR+P  NQ+N VTA GR DPNQ TGI I
Sbjct:  339 FVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISI 503          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.320e-49
Identity = 96/165 (58.18%), Postives = 117/165 (70.91%), Query Frame = 1
Query:  436 YIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            ++I  + G Y E + VP  K NLM             + NVVDG TT+N ++ AVVG+ F+A D+TF+NTAGP KHQAVALR  ++ S+FYRC    YQDTLYVHSLRQFY  C I GTVDFIFGNAAA+FQNC+I+AR+P   Q+N +TA GR DPNQNTGI I
Sbjct:  334 FVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISI 498          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.631e-48
Identity = 124/299 (41.47%), Postives = 168/299 (56.19%), Query Frame = 1
Query:   52 DELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKW-PEWL-SAGDRRLLQXXXXXXXXXXXXX--GSGNYLTXXXXXXXXPEGSSR-RYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQ 933
            +++   +SAA+TNQ+TC      E++ ++  E    G    F +  N   ++ +  D       V   SK R+L  + ++ P ++ S+  RRLL+               GSG + T           SS  R  I +KAG Y EN+ +P K+ N+M             SR+   G TT+ +ATVA +G+GF+ARD+TF N AGP   QAVALRVG+D S  +RC +  YQD+LY HS RQFY    I GTVDFIFGN+A VFQ+C+I AR+P P QRN VTAQGR +P QNTGI IQ
Sbjct:  122 EDVHTWLSAALTNQDTC------EQSLQEKSESYKHGLAMDF-VARNLTGLLTSSLDL-----FVSVKSKHRKLLSKQEYFPTFVPSSEQRRLLEAPVEELNVDAVVAPDGSGTHKTIGEALLSTSLASSGGRTKIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQ 408          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.197e-48
Identity = 119/289 (41.18%), Postives = 149/289 (51.56%), Query Frame = 1
Query:   70 VSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTXXXXXXXXPEG--SSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            +S A+TN ETC  G S            +     + H+ SN LA         +   ++          D   +P W+S  +RRLLQ             GSG++ T             +S R++I +K G Y+EN+ V     N+M              R+V  G TT++SAT  + G  F+A+ I FQNTAGP+K QAVALR  SDLS FYRC +  YQDTL VHS RQFY  C I GTVDFIFGNAA VFQNC I  R P   Q N++TAQGR D  QNTGI I
Sbjct:  143 LSTALTNTETCRRGSSDLNVSDFTTP--IVSNTKISHLISNCLA---------VNGALLTAGKNDSTTGDSKGFPTWVSRKERRLLQLQSVRANLVVAKDGSGHFKTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISI 420          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.800e-46
Identity = 100/236 (42.37%), Postives = 142/236 (60.17%), Query Frame = 1
Query:  259 KARRLDDETKWPEWLSAGDRRLL----QXXXXXXXXXXXXXGSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGST--------TFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            K R L +E ++P W++   RRLL    +             GSG   T        P  ++++++I IK G Y+E VEV KK +++MF            ++ V+ G          T+ +A+VAV GD F+A+DI F+NTAG ++HQAVALRV +D + F+ C M  YQDTLYVH+ RQFY +C ++GT+DF+FG+A AVFQNC+   RRP  +Q+ +VTAQGR D  + TGIVI
Sbjct:  357 KDRHLSEEGEFPPWVTPHSRRLLARRPRNNGIKANVVVAKDGSGKCKTIAQALAMVPMKNTKKFVIHIKEGVYKEKVEVTKKMLHVMFVGDGP-------TKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVI 585          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.575e-46
Identity = 103/248 (41.53%), Postives = 139/248 (56.05%), Query Frame = 1
Query:  190 NALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQ 933
            NAL+M+ +  D           ++A  L+ +    +   A  RRLLQ             GSG Y T        P+ ++  +II IKAG Y+E +++PK   N++             +++V DG +TF++ TV V G  F+A++I F+NTAGP K QAVALRV +D +  Y C +  YQDTLYVH+ RQFY  C I GTVDFIFGN  AV QNC +  R+P  NQ  MVTAQGR +P Q   IV+Q
Sbjct:   14 NALSMLNSFGD---------MVAQATGLNRKLLTTDSSDATARRLLQISNAKPNATVALDGSGQYKTIKEALDAVPKKNTEPFIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQ 252          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.375e-45
Identity = 116/293 (39.59%), Postives = 156/293 (53.24%), Query Frame = 1
Query:   70 VSAAMTNQETCLDGFSHERADKKIREELME--GQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXG---SGNYLTXXXXXXXXPEGSSR-RYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            +S A TN ETC  G      D  + + +M      ++  +  N LA+     +G + K   DH + A   +    +P W+S  +RRLL                  SG++ +             + R++I +K G YREN++V     N+M              R+V  G TT+NSAT    G  F+A+D+TF NTAGP + QAVA+R  SDLS FYR  +  +QDTLY+HS RQF+  C I+GT+DFIFGNAA VFQNC I  RRP   Q N++TAQGR DP QNTGI I
Sbjct:  195 LSTAQTNIETCRSGSE----DLNVSDFVMPVISNKNLSDLIGNCLAV-----NGVLMKQH-DHTTTANHKE---YFPSWVSRHERRLLVSASLAKSSPHLVVAQDRSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITI 474          
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.094e-44
Identity = 100/189 (52.91%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  370 GSGNYLTXXXXXXXXPEG--SSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVI 930
            GSG+Y T         E    S RY+I +K G Y E V V  K  N+M              ++   G +T+ SAT    GDGF+ RDIT +NTAGP  HQAVALR  SD+S FYRC +  YQDTLYVHS RQF+  C I GTVDFIFGNAAAV QNC I AR P PN  N +TAQ R +PNQ TGIVI
Sbjct:  171 GSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVI 358          
The following BLAST results are available for this feature:
BLAST of FC877835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME_MEDSA1.129e-4937.79Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME13_ARATH1.129e-4939.47Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME47_ARATH1.475e-4958.18Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME25_ARATH7.320e-4958.18Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME16_ARATH1.631e-4841.47Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME60_ARATH6.197e-4841.18Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME43_ARATH5.800e-4642.37Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME_PETIN7.575e-4641.53Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME33_ARATH8.375e-4539.59Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME38_ARATH1.094e-4452.91Putative pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA53BF06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877835 ID=FC877835; Name=FC877835; organism=Citrus clementina; type=EST; length=936bp
CTTCAGGGTTATCCTGCAGCAGCTAATAACAAGTCGATAGCTGAACAAGC
TGATGAGTTAAAGATCCTTGTGAGTGCTGCAATGACTAATCAAGAAACTT
GCCTTGATGGGTTCTCCCACGAGCGCGCTGATAAAAAGATCCGTGAAGAA
TTAATGGAGGGTCAAATGCACGTGTTTCACATGTGCAGCAATGCCTTGGC
AATGATCAAGAACATGACTGATGGTGATATAGGCAAAGACATTGTTGATC
ATTACTCTAAAGCCCGGCGTCTTGATGATGAAACGAAATGGCCTGAGTGG
TTATCAGCTGGGGACAGGAGGCTGCTGCAGGCAACAACGGTGGTACCTGA
TGTTACCGTGGCGGCTGATGGAAGCGGTAACTACCTGACTGTGGCCGCGG
CGGTGGCGGCTGCACCGGAGGGGAGTAGTCGGAGGTACATTATAAGGATT
AAAGCTGGGGAGTACAGAGAAAATGTGGAGGTGCCGAAGAAGAAAATTAA
TCTTATGTTTATTGGAGATGGGAGGACTACTACAATAATCACCGGTAGCA
GGAATGTGGTTGATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTG
GTAGGGGACGGATTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGG
TCCGTCAAAACATCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAG
CATTCTATAGGTGTGACATGCTAGCATACCAAGACACTCTCTATGTACAC
TCACTTCGCCAATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTT
CATTTTCGGAAATGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTC
GCCGCCCCAATCCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGAC
GACCCGAATCAGAACACAGGCATAGTGATACAAAAA
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