FC877835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.441e-36 Identity = 103/314 (32.80%), Postives = 146/314 (46.50%), Query Frame = 1 Query: 52 DELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQM------HVFHMCSNALAM----IKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXG-------------------SGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNV--VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRD 900 D+LK ++ Q C+D K + E + ++ +FH + A++ + +M G++G+ LD + P+W S DR+L+ G SG + T PE + R II IKAG Y+E V +PKK N+ R+V G+TT S TV V +GF+A+ I FQNTAGP HQAVA RV D + + C YQDTLYV++ RQFY + +++GTVDFIFG +A V QN I R+ +P Q N VTA G + Sbjct: 145 DQLKQWLTGVFNYQTDCIDDIEESELRKVMGEGIAHSKILSSNAIDIFHALTTAMSQMNVKVDDMKKGNLGETPAPDRDLLEDLDQKGL-PKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNE 457
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.527e-35 Identity = 98/297 (33.00%), Postives = 141/297 (47.47%), Query Frame = 1 Query: 55 ELKILVSAAMTNQETCLDGF--SHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXGSGNYLTXXXXXXXXPEGSSRRYIIRIK--AGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPN-PNQRNMVTAQGRDDPNQNTGIVI 930 +++ +SAAMT Q+ C D S + + + H+ + SN+L ++ + K T P W++AG+RRLL G +R +++ K +G+YR +E + G++ ++AT+ V GDGF+ARDI +N AGP HQA+AL + SD S YRC + YQDTLY +LRQFY C I GT+DFIFGNAAAVFQ+C+I RRP+ N++ A GR D QNTG + Sbjct: 142 DVQTWLSAAMTFQQACKDSILDSGGSSSASAISHISQKMDHLSRLVSNSLTLVDTIMKNPKPKT------------KSTALPRWVTAGERRLLV------------------------------GRARAHVVVAKDGSGDYRTVMEAVTAA-----HGNGKDLTVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFAL 391
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.899e-34 Identity = 101/313 (32.27%), Postives = 145/313 (46.33%), Query Frame = 1 Query: 52 DELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQM------HVFHMCSNALAM----IKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQXXXXXXXXXXXXXG-------------------SGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNV--VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGR 897 D+LK ++ Q C+D K + E + ++ +FH + A++ + +M G++G+ LD + P+W S DR+L+ G SG + T PE + R II IKAG Y+E V +PKK N+ R+V G+TT S TV V +GF+A+ I FQNTAGP +QAVA RV D + + C YQDTLYV++ RQFY + +++GTVDFI G +A V QN I R+ +P Q N VTA G+ Sbjct: 132 DQLKQWLTGVFNYQTDCIDDIEESELRKVMGEGIRHSKILSSNAIDIFHALTTAMSQMNVKVDDMKKGNLGETPAPDRDLLEDLDQKGL-PKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGK 443
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.777e-29 Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNV----------VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIV 927 GSG+Y + P G++ R +IR+ G YR+ V VPK+K + F + V G+ TF +V V G+ F+A +ITF+N+A QAVA+RV +D AFY C L +QDTLY+H +Q+ C I G+VDFIFGN+ A+ ++C IH + + +TAQ R ++TG V Sbjct: 13 GSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYV 203
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.145e-24 Identity = 70/188 (37.23%), Postives = 89/188 (47.34%), Query Frame = 1 Query: 292 PEWLSAGDRRLL----QXXXXXXXXXXXXXGSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI 843 P WLS D++ L + +GNY P+ S +R++I IK Y E V + K NL + + + TFN+AT A GDGF+ D+ F+NT P K V LRV D+S YRC + YQD LY H RQ Y + TVDFI GNAAAVFQ C I Sbjct: 54 PSWLSHVDKKDLYLNDETLKKITDILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.371e-23 Identity = 69/179 (38.55%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 433 RYIIRIKAGEYRENVEVPKKK--INLMFXXXXXXXXXXXXSRNVVDGST----TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQK 936 R +I++ AG Y+E V +P K I + + D T+NSA+ AV F+A++ITF+NT G QAVALRV +D +AF+ C ML QDTLY H R +Y C I G+VDFIFGNA ++++ C +HA ++ VTAQGR ++TG K Sbjct: 113 RVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVK 288
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.424e-22 Identity = 67/194 (34.54%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI--HARRPNPNQR---NMVTAQGRDDPNQNTG 921 G N+ T S RR +I I +G Y E V +PK K N+ + + TF ATV V G F+A++I+F N A G QAVA+R+ D SAF C QDTL+ R ++ C I G++DFIFGNA +++Q+C I A + +P + VTA GR ++N+G Sbjct: 97 GCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSG 290
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.424e-22 Identity = 70/196 (35.71%), Postives = 99/196 (50.51%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNV------VDGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTG 921 G G+ +T P+ +S+R I I G YRE V VPK K + F S + DG T+ +A+V++ D F A ITF+NT AG QAVALR+ D + FYR +L QDTL+ + ++ C I G VDFIFGNA +++Q+CDIH+ + + A RD ++TG Sbjct: 88 GGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTG 280
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.301e-21 Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTG 921 G GN+ P+ SS + +I + +G YRE V V + K NL+ + T +S + V F A +I+F+N A G + QAVALR+ D +AFY C QDTL R F+ C I G++DFIFGN +++Q+C I+ A+ +TAQGR ++ +G Sbjct: 97 GCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSG 287
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.899e-21 Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 1 Query: 424 SSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIV 927 S + +I I G YRE V + K NL+ + + TF+S +VAV G+ F A +I+F+NTA G QAVAL+V D +AFY C QDTL R F+ C I G++DFIFGN +++++C +H+ N +TA G+D TG V Sbjct: 66 SQSKTLILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFV 237 The following BLAST results are available for this feature:
BLAST of FC877835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877835 ID=FC877835; Name=FC877835; organism=Citrus clementina; type=EST; length=936bpback to top |