FC877835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.894e-19 Identity = 55/166 (33.13%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 424 SSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTG 921 +S+ Y I +K G YRE V +P +K + S DG S T+ + F+ R +T QN G + +AVALRV +D +AFY C + +YQDTL + ++ +C I G DFI G+A+++++ C +H+ PN +TAQ R + +G Sbjct: 77 NSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPN---NGSITAQMRTSATEKSG 234
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.346e-18 Identity = 60/194 (30.93%), Postives = 94/194 (48.45%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG-----PSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIV 927 G G+Y + P G+S I+ ++ G Y+E V +P+ K + S++ VD SAT V + F+A I+ +N A S++Q+VA V +D AFY C + +TL+ + R +Y C I G++DFIFG A ++F NC+I +R P +TA R+ + TG V Sbjct: 52 GKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKP--YGSITAHHRESAEEKTGYV 240
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.944e-17 Identity = 60/197 (30.46%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG-PSKHQ--------AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIV 927 G GN+ T P ++ + I +KAG YRE + +P+KK ++ D ++ S T A + D + + ITF N+ PS + AVA +G D SAFY QDTL+ R ++ C I G VDFI G+ +++Q+C I + P +TAQGR + N G V Sbjct: 35 GHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRVEWD----DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFV 227
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.539e-17 Identity = 59/197 (29.95%), Postives = 88/197 (44.67%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAG-PSKHQ--------AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIV 927 G GN+ T P + + I +KAG YRE +++P +K ++ D + S T + + D + + ITF N+ PSK + AVA +G D SAFY QDTL+ R ++ C I G VDFIFG +++Q+C I + P +TAQGR +P G + Sbjct: 40 GHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRLTRVEWD----DHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFI 232
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.331e-17 Identity = 56/180 (31.11%), Postives = 87/180 (48.33%), Query Frame = 1 Query: 415 PEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGST------TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTG 921 P+ +++ I+I G YRE V VP K + F D T+ +A+V V + F AR+I+F NTA G QAVA R+ D + F C QDTL + R ++ C I G++DFIFGN +++++C++H+ ++ + A GR P + TG Sbjct: 82 PKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTG 258
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.807e-16 Identity = 57/188 (30.32%), Postives = 84/188 (44.68%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGP----SKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTG 921 G N+ T P G+ R II++ G Y E V + + + T SAT+ V + F A +T +NTA S+ QA+A+R+ +D +AFY C +QDTL F+ C I GT DFIFG A+++ N +HA + ++TAQGR + G Sbjct: 73 GGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYGTV-ESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNG 256
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 376 GNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKK--INLMFXXXXXXXXXXXXSRNVVDGST----TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH 846 G + T P G+++R II++ GEYRE V + + K I LM DG+ T +SA++ ++ D F+A +I +NTA G +K QA+++R+ + +AFY C +QDT+ + F+ C + GT DFIFG+ +++ +H Sbjct: 74 GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVI-------TYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLH 234
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.180e-14 Identity = 50/168 (29.76%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 376 GNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKK--INLMFXXXXXXXXXXXXSRNVVDGST----TFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH 846 G + T P G+++R II++ GEY+E V + + K I LM DG+ T +SA++ ++ D F+A +I +NTA G +K QA+++R+ + +AFY C +QDT+ + F+ C + GT DFIFG+ +++ +H Sbjct: 74 GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVI-------TYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLH 234
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.225e-13 Identity = 63/196 (32.14%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 415 PEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVV--DGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKH----------QAVALRV--GSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR----PNPNQRNMVTAQGRDDPNQNTGIVI 930 P GS+ ++I IK G Y E + + + ++L + + DGS T S+T+ + F A+ +T +N A +K QAVAL V D + F ++ YQDTLYV R F++ C I+GTVDFIFG+ A+F NCD+ +R + N +TA + NQ G+VI Sbjct: 53 PAGSTP-FVILIKNGVYNERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVI 246
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.905e-13 Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA----GPSKH-QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVF 828 G G++ T G++RR II+I G Y+E V + + K + T +SAT+ V+ D F+A +I +N+A G K QA+++R+ + +AFY C YQDT+ + F+ C I GT DFIFG+ +++ Sbjct: 49 GRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYGTV-DSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLY 205 The following BLAST results are available for this feature:
BLAST of FC877835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877835 ID=FC877835; Name=FC877835; organism=Citrus clementina; type=EST; length=936bpback to top |