FC877835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.472e-13 Identity = 63/196 (32.14%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 415 PEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVV--DGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKH----------QAVALRV--GSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR----PNPNQRNMVTAQGRDDPNQNTGIVI 930 P GS+ ++I IK G Y E + + + + L + + DGS T S+T+ + F A+ +T +N A +K QAVAL V D + F ++ YQDTLYV R F++ C I+GTVDFIFG+ A+F NCD+ +R + N +TA + NQ G+VI Sbjct: 53 PAGSTP-FVILIKNGVYNERLTITRNNLLLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVI 246
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.472e-13 Identity = 49/164 (29.88%), Postives = 72/164 (43.90%), Query Frame = 1 Query: 370 GSGNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKH----QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA 849 G G++ T P + R II++ G Y E V V + + + T SAT+ V FLA ++ NT+ K QA+A+R+ D +AFY C +QDTL F+ +C I GT DFIFG A+++ +HA Sbjct: 73 GGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAKYGTV-ESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA 235
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12 Identity = 52/173 (30.06%), Postives = 73/173 (42.20%), Query Frame = 1 Query: 442 IRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSRNVVDGSTTFNSATVAVVGDGFLARDITFQN------TAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQ 933 I I G Y E V +P+ K + D T SAT + ITF+N ++ P+K A+ +G D A +QDTLY R +Y C+I+G +DFIFG A ++F+ C + R P +TAQGRD P G V + Sbjct: 71 ILISNGIYSEKVTIPRGKGYIYMQGGGIEKTIIAYG----DHQLTNTSATFTSYPSNIIITGITFKNKYNIASSSSPTKPAVAAMMLG-DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFK 238
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.551e-11 Identity = 46/126 (36.51%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 562 DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQK 936 D + TF + V G ++ NT G + HQA+AL +D +Y C+ YQDTL + Q Y + I G VDFIFG +A A FQN DI P + +TA GR + VI K Sbjct: 110 DLTATFRNKAV-----GSQVYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINK 228
BLAST of FC877835 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.912e-11 Identity = 54/195 (27.69%), Postives = 79/195 (40.51%), Query Frame = 1 Query: 376 GNYLTXXXXXXXXPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFXXXXXXXXXXXXSR-------NVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQK 936 G+Y T S+ I I+ G Y E V +P L+ + + D +AT+ +G ++ NT G + HQA+A+ + +Y C YQDTL + Q Y I G VDFIFG +A A F CDI P+ + +TA GR + ++ VI K Sbjct: 35 GDYDTISAAVDALSTTSTETQTIFIEEGSYDEQVYIPALSGKLIVYGQTEDTTTYTSNLVNITHAIALADVDNDDETATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHK 227 The following BLAST results are available for this feature:
BLAST of FC877835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877835 ID=FC877835; Name=FC877835; organism=Citrus clementina; type=EST; length=936bpback to top |