FC877840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.808e-26 Identity = 83/237 (35.02%), Postives = 118/237 (49.79%), Query Frame = 2 Query: 191 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGV----GLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 883 S +A ++EFIA + + T DG G++ IA A +FV V A ISGGH+NPAVT GL + ++L+ Y +AQCLG+I V + T G + G S G+ G+ EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV+ W++WVGP +G A+A + Sbjct: 16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTS-----DGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI-----VACLLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.808e-26 Identity = 79/239 (33.05%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 E +SF+RA+ AEF + K PA +L IA AFG ++ +V +SG HINPAVTF + ++SL RA+ Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L IGF++ + HL + TG +NPARS AV+ + + + W++WVGP IG A+ ++FI Sbjct: 3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL--KWAAGPAN---------VLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPA-AIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL---TRNFTNHWVYWVGPIIGGALGGLVYDFI 222
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26 Identity = 84/231 (36.36%), Postives = 116/231 (50.22%), Query Frame = 2 Query: 200 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK--AFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 883 +A +AEFIA I Y T N G++ IA A +FV V A ISGGH+NPAVTFGL + ++++ + Y +AQ LGA L+K K+ T G +EL G+ EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV + W++WVGP IG +A + Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISELE-------GVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26 Identity = 80/229 (34.93%), Postives = 113/229 (49.34%), Query Frame = 2 Query: 200 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 883 +A +AEFIA I Y T A G++ +A A +FV V A ISGGH+NPAVT GL + ++++ Y +AQ LG+ L+K G +A G + G+ EII TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV+ + W++W GP IG +A F + Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADA----ALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHG----VAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26 Identity = 77/239 (32.22%), Postives = 118/239 (49.37%), Query Frame = 2 Query: 176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + ++F+ Sbjct: 1 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAPGP-------LHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFL 220
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26 Identity = 77/239 (32.22%), Postives = 118/239 (49.37%), Query Frame = 2 Query: 176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA Y+ AQ LGA++G ++ + R N L G S G EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARS A++ + + + W++WVGP IG + + ++F+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFL 222
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.496e-26 Identity = 72/208 (34.62%), Postives = 101/208 (48.56%), Query Frame = 2 Query: 314 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAI-------------SGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQ--WLFWVGPFIGAAIAAFYHNFI 892 G+G G+A AFG + + Y ISG H+NPAV+ GL+ + + Y+VAQ LGAI +G + K F + Y + G GYS L E++ T + + ATD + A APL IG A+ ++HL +IP+T T +NPARS G A+ W Q WLFW+ P IGA + A + I Sbjct: 32 GIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 8.484e-26 Identity = 77/229 (33.62%), Postives = 114/229 (49.78%), Query Frame = 2 Query: 200 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 883 +A ++EFIA + + T A G++ +A A +FV V A ISGGH+NPAVT GL + ++++ Y +AQCLG+I L+ G +A G G+ EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV+ + W++WVGP +G A+A + Sbjct: 19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDA----ALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.447e-25 Identity = 81/229 (35.37%), Postives = 111/229 (48.47%), Query Frame = 2 Query: 200 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 883 +A +AEFIA I Y T N G++ IA A +FV V A ISGGH+NPAVTFGL + ++++ V Y VAQ LGA V + T G S G+ E++ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARS G AV + W++WVGP +G +A + Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGA-----TVACLLLGFVTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVY 231
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.890e-25 Identity = 68/200 (34.00%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 314 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVG---LVKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 G+G LG+A AFG + + Y ISG H+NPAV+ GL++ + + + Y+VAQ LG ++ G L+ + + + G +N + GYS L +E++ T + + + AT KR+ + AP+ IG + ++HL +IP+T T +NPARS A +Y D A WLFWV P +GA + A + I Sbjct: 32 GIGYLGVALAFGLSVLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATS-KRAPQG-----FAPIAIGLTLTLIHLISIPVTNTSVNPARST-AVALYVGDWAVSQLWLFWVAPILGAVLGALAYRLI 224 The following BLAST results are available for this feature:
BLAST of FC877840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877840 ID=FC877840; Name=FC877840; organism=Citrus clementina; type=EST; length=924bpback to top |