FC877840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14 Identity = 55/189 (29.10%), Postives = 91/189 (48.15%), Query Frame = 2 Query: 329 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 GI +G ++ V++Y T ISG H NPAVT + R+ + +Y+ AQ G+ ++ + L F+ + +G S L AEII +F+L++ + R+ V LA + +G + + PI+G +NPARSLG A++ + W++ VGP +G F +N I Sbjct: 77 GICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFG-----TTPADSPARALVAEIIISFLLMFVISGVATDNRA-----VGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMG---VYKHIWVYIVGPVLGVISGGFVYNLI 252
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14 Identity = 65/241 (26.97%), Postives = 103/241 (42.74%), Query Frame = 2 Query: 179 LTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 L SF + LI EF+ + ++ P V + GIA +G ++ V++Y +SG H NPAV+ ++K + Y+ AQ LG A + + LV + G S E I TF L++ + + KR+ A + IG + + L + PI+G +NPARSLG A+I+ + D WL+ V P IGA A+ + + Sbjct: 36 LVSVSFVQKLIGEFVGTFTMIFAGCSAIVVNETYGKP---------VTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGS-----FAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWG---CYKDLWLYIVSPVIGALSGAWTYGLL 259
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14 Identity = 58/199 (29.15%), Postives = 94/199 (47.24%), Query Frame = 2 Query: 311 AGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG-----LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 A + LG + A G ++ V++Y T ISG H+NPAVT R ++ Y AQ GA+ ++KA + G +T G LA EI+ TF +++ + R+ V LA L +G AV + + P++G +NPAR+L AV N + W++++GP +G A+ + +I Sbjct: 83 ARISQLGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPI----------AVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VFTGLWIYFLGPVVGTLSGAWVYTYI 263
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14 Identity = 58/217 (26.73%), Postives = 93/217 (42.86%), Query Frame = 2 Query: 308 CAGV----------GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG-------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY-------NKDKAWDDQWLFWVGPFIGAAIAAFYHN 886 CAGV G + + + +G + + Y GISG H+NPA+T L +Y+ AQ +GAI G ++ ++ A +L +STG + +E+IGTFVLV + + + L PL +GF + + ++ TG INPAR LG + + W W+ VGP +G + ++N Sbjct: 22 CAGVNLKKSLSFQSGWIVVVFGWGLGVAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVIIYLHYLPHWKSTDDPAAKLG-VFSTGPSIPHTFANVLSEVIGTFVLVLGILAI------GANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFLPIPGKGSSNWKYAWVPVVGPILGGSFGGVFYN 231
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: GLPF_STRPN (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae GN=glpF PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.449e-14 Identity = 64/198 (32.32%), Postives = 95/198 (47.98%), Query Frame = 2 Query: 320 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG-------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY------NK-DKAWDDQWLFWVGPFIGAAIA 871 G + I +G + V V+ + +S ++NPAVT G+ L + + Y++AQ GA+ G LV K +Y N LA +STG L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR LG +++ NK D W W+ VGP IGAA+A Sbjct: 37 GWIVITMGWGIAVAVAVFVSGKLSPAYLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALA 227
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: PDUF_SALTY (Propanediol diffusion facilitator OS=Salmonella typhimurium GN=pduF PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.729e-14 Identity = 69/223 (30.94%), Postives = 99/223 (44.39%), Query Frame = 2 Query: 311 AGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYSTGVGLA--------AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFW-----------VGPFIGA-AIAAFYHNFI 892 A +G+ I +G I + VY TAGISGGH+NPAVT L+L + + Y++AQ GA G L S +T + + +LA +ST A E++ T +L+ + + TD LAPL IG V ++ +T P+TG +NPAR G ++ W + + V P IGA A AA Y FI Sbjct: 35 ASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKG---PLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPK-LFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFI 253
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.271e-13 Identity = 63/204 (30.88%), Postives = 90/204 (44.12%), Query Frame = 2 Query: 320 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELA---DGYST---GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY-------NKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 G + I +G + + VY ISG HINPAVT GL + + Y+ +Q LGA G LV ++ +LA G + G L EIIGT VL+ V K + L PL +GF V+ + L+ TG INPAR G + + +D W W+ +GP IG + A +N++ Sbjct: 36 GWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLA------DGLNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGASLYNWL 233
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: GLPF_STRCO (Probable glycerol uptake facilitator protein OS=Streptomyces coelicolor GN=glpF PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.660e-13 Identity = 69/229 (30.13%), Postives = 99/229 (43.23%), Query Frame = 2 Query: 320 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRY----------GG----------------GANELADGYSTG-------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY------NKDKA-WDDQWLFWVGPFIGAAIAAFYHN 886 G L IA+ +G + Y + +SG H+NPAVT G+ + + Y Q LGA+ G LV +YY ++ GG GA + +STG LA EIIGTFVL+ + + + + + +L L GF V + L+ TG INP R LG +++ NK + W W+ VGP IG AIA +N Sbjct: 39 GWLAIAFGWGFAVMTAAYISGPLSGAHLNPAVTVGIAI-KDGDWSNTPTYFAGQLLGAMIGAVLVWV---AYYGQFQAHLTDREIVGGPGAQDTTAKSVEAQEKGAGPVLGVFSTGPEIRHTVQNLATEIIGTFVLLLAILT---QGLNDEGNGLGILGALITGFVVVSIGLSLGGPTGYAINPVRDLGPRIVHALLPLPNKGGSDWSYAWIPVVGPLIGGAIAGGVYN 260
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.831e-13 Identity = 69/213 (32.39%), Postives = 92/213 (43.19%), Query Frame = 2 Query: 326 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA--------------EIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSLG----AAVIYNKDKA-----WDDQWLFWVGPFIGAAIAAFYHN 886 L AW FG M+ V Y GISGGHINPAVT + + RK + +Y+VAQ +GA G + + S T + GG + +TG L E IG +LV + + D DS+ P + L IGF V + +A T INPAR LG A++I A W W W GP G A ++ Sbjct: 384 LSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTT--ATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGPIAGGIAGALIYD 586
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.831e-13 Identity = 57/194 (29.38%), Postives = 90/194 (46.39%), Query Frame = 2 Query: 326 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG-----LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892 LG + A G ++ V++Y T ISG H+NPAVT R ++ Y AQ GA+ ++KA G +T G L EI+ TF +++ + R+ V LA L +G AV + + P++G +NPAR+L AV N + W++++GP IG A+ + +I Sbjct: 85 LGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPI----------AVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VFTGLWIYFLGPVIGTLSGAWVYTYI 260 The following BLAST results are available for this feature:
BLAST of FC877840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877840 ID=FC877840; Name=FC877840; organism=Citrus clementina; type=EST; length=924bpback to top |