FC877840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 72/265 (27.17%), Postives = 98/265 (36.98%), Query Frame = 2 Query: 125 SAKDYTDPPPEPLFD----------AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA--------------EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVG 847 S++D T PP E + + + L W R E A +G Q G L AW FG M+ V Y GISGGH+NPAVT L + RK + +Y+ Q GA G L + S T + GG + +TG L E IGT VLV +F+ D S + +G + + +A T +NPAR LG + AW W+G Sbjct: 272 SSQDITMPPNEIIAEESLDSGSDTETLYLNYWCKIRHFFREGFAEFLGTLVLVVFGVGSNLQATVTNGAGG--SFESLSFAWGFGCMLGV--YIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTP--ATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILDDTNSPPTQGMTAFI---VGLLIAAIGMALGYQTSFTLNPARDLGPRMF-----AW------WIG 516
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 59/216 (27.31%), Postives = 94/216 (43.52%), Query Frame = 2 Query: 326 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA--------FQKSYYTRYGGGAN-ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQW------------LFWV---GPFIGAAIAAF 877 + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA LV F+++++ G + +LA +ST A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G V AW W F V P +GA + AF Sbjct: 44 ISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFSPIVGAIVGAF 249
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 50/175 (28.57%), Postives = 76/175 (43.43%), Query Frame = 2 Query: 314 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLG 787 G+ + I W G + + +Y +AG+SG H+NPAV+ L+L + Y+ AQ GA LV S + + N LA +ST G E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR G Sbjct: 43 GLWEISIIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRG---PLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP9_HUMAN (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.519e-11 Identity = 57/220 (25.91%), Postives = 91/220 (41.36%), Query Frame = 2 Query: 320 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGG--------------ANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVP-VLAPLPIGFAVFMVHLATIPITGTGINPARSL-----------GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI*EL 901 G++ I F + + +Y G+SGGHINPAV+ + L ++ + Y+ AQ LGA G V + GG A A S A +++ T +L+ VF+ D +R+ P L P+ IG + ++ + +G +NPAR L G V + W W+ VGP +GA I + + E+ Sbjct: 56 GVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFD----SRNLGAPRGLEPIAIGLLIIVIASSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFRAGNNFW---WIPVVGPLVGAVIGGLIYVLVIEI 268
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 44/177 (24.86%), Postives = 75/177 (42.37%), Query Frame = 2 Query: 353 MIFVLVYCTAGISGGHINPAVTFGLFLA--RKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAF 877 ++FV + G NP + A SL + + AQ GA+ G + + Y GG + D ++ G AE++ TFV+ V + P++ I + L+ TG +NPA + G A + N+ W+ +++W+ PFIGA +AA+ Sbjct: 57 LLFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGGPSLKVDPHT---GAGAELVLTFVITLAVLLII-----VKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAW 225 The following BLAST results are available for this feature:
BLAST of FC877840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877840 ID=FC877840; Name=FC877840; organism=Citrus clementina; type=EST; length=924bpback to top |