FC877840

Overview
NameFC877840
Unique NameFC877840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length924
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.328e-30
Identity = 85/241 (35.27%), Postives = 124/241 (51.45%), Query Frame = 2
Query:  176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892
            E T     +A +AEFI+            I Y   T+     DG A   G++  + A    +FV V   A ISGGH+NPAVTFG F+   ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA S G AV+     +W + W++W GP IG  IA   +  +
Sbjct:   13 EATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTN-----DGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 132.494 bits (332), Expect = 3.328e-30
Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  332 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA-AFYHNF 889
            IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI+G  ++KA   S     G G   +A G STG G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G AV+      + D W++WVGP +G  +A A Y  F
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLF 235          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.328e-30
Identity = 80/234 (34.19%), Postives = 118/234 (50.43%), Query Frame = 2
Query:  191 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA-AFYHNF 889
            + +R L+AEF+             +G+     P           +  IA+ FG ++  L      +SG HINPAVT GL +   +S+++   Y+V+QC+GAI+G  L+KA   S     G G   +    + G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS G AV+      W DQW++WVGP +G  +A A Y  F
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPT----------MTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIG-GLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLF 236          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.347e-30
Identity = 84/240 (35.00%), Postives = 126/240 (52.50%), Query Frame = 2
Query:  176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892
            E+   +F++A+ AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+ AQ +GAI+G G++  +      R     N L +  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+ N+       W+FWVGP +GA +AA  + ++
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL-YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAMLAAILYFYL 224          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.347e-30
Identity = 83/240 (34.58%), Postives = 126/240 (52.50%), Query Frame = 2
Query:  176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892
            E+   +F++A+ AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RA+ Y+ AQ +GAI+G G++         R     N L++  + G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+ N+       W+FWVGP +GA +AA  + ++
Sbjct:    4 EVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPG-NARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAAILYFYL 224          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.652e-29
Identity = 83/239 (34.73%), Postives = 119/239 (49.79%), Query Frame = 2
Query:  176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892
            EL   +F RA++AEF+A            + +             A   +L IA AFG  I  LV     +SG HINPAVT    +   VS +RAV Y+ AQ LGA++G  L+         R     N L +  + G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARSL  A++  K   +DD W+FW+GP +GA +A+  +N++
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQ-----------ALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPP-AIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYV 222          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.157e-29
Identity = 89/244 (36.48%), Postives = 126/244 (51.64%), Query Frame = 2
Query:  176 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892
            EL+     +A +AEFI+            + +   TD           G++  + A    +FV V   A ISGGH+NPAVTFG F+   +SL++A++Y VAQ LG++    L+K           GGA   A   S GVG    +  E++ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      W++ W++WVGP  GAAIAA  ++ I
Sbjct:   13 ELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGG----AATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIAT--------GGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.157e-29
Identity = 70/192 (36.46%), Postives = 106/192 (55.21%), Query Frame = 2
Query:  314 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV-------KAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAI 868
            G+G+LG+A+AFG  +  + +    ISG H+NPAV+FGL +  +      + Y++AQ +GAI   G++         F+ S      G A+    GY+ G G  +E++ T + +  +  ATD +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    WLFWV P IGAAI
Sbjct:   34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAI 218          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.818e-29
Identity = 87/236 (36.86%), Postives = 124/236 (52.54%), Query Frame = 2
Query:  200 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHNFI 892
            RA +AEFI+            I +   TD        +G+    +A AFG  +FV V   A ISGGH+NPAVTFG+ L   ++L+R ++Y +AQ LG+++       F  S+ T   GG    A G S GVG    L  EI+ TF LVYTV+ +A DPK  +    +  +AP+ IGF V    LA    +G  +NPA + G AV+      W + W++W GP IG  +A   ++F+
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTP--SGLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAA-----CFLLSFAT---GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of FC877840 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.806e-29
Identity = 73/194 (37.63%), Postives = 107/194 (55.15%), Query Frame = 2
Query:  308 CAGVGI------LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA 871
            C GV I      + IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI+G  ++K    + + R       LA G +  +G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G AV  N D  W + W++W GP +G  +A
Sbjct:   47 CTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVA 233          
The following BLAST results are available for this feature:
BLAST of FC877840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
TIP1_MEDTR3.328e-3035.27Probable aquaporin TIP-type OS=Medicago truncatula... [more]
AQP_ANOGA3.328e-3040.64Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP_AEDAE3.328e-3034.19Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP5_RAT4.347e-3035.00Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE4.347e-3034.58Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP2_SHEEP1.652e-2934.73Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
TIP12_MAIZE2.157e-2936.48Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQPZ_PSEPK2.157e-2936.46Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP12_ARATH2.818e-2936.86Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQP_CICVR4.806e-2937.63Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99CF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877840 ID=FC877840; Name=FC877840; organism=Citrus clementina; type=EST; length=924bp
AAGGCTTCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCT
CTGTTTCTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACT
GGGGTGGCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACC
GCCGGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACA
GAGCCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACT
GTCTTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGT
CGACGGCTGTGCCGGCGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTG
GCATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCAC
ATTAACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTT
GGTCCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCG
GTGTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGA
GGTGGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGC
CGCCGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCA
CTGATCCCAAGAGAAGCGCCAGAGACTCCCATGTCCCCGTTTTGGCACCG
CTCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAAT
CACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTT
ACAACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCC
TTCATCGGTGCAGCAATTGCGGCTTTCTACCACAATTTCATCTGAGAGCT
GGAGCTGTCAAGGCTCTTGGGTTC
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