FC877845

Overview
NameFC877845
Unique NameFC877845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 80/237 (33.76%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAAHLVKNGPLAVAINA 884
            + L+KK + K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D    C ++ +  AA    +  +   +E  +   + + GP++VAI+A
Sbjct:   27 WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDEN--CMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 252          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.635e-26
Identity = 75/232 (32.33%), Postives = 117/232 (50.43%), Query Frame = 3
Query:  201 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +K K+ K+Y+  EE  +R  +++ NL+      K +    +G T     F+D T  EFR++   +     +   + Q  +  +  LP   DWR++G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            ++GC  G  + AF Y LK  GL  E  YPY G D    C++     +A++  F  +  +E  +   +   GP++ AI+A
Sbjct:   32 WKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQV--SIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDC-------SKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD--GPCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDA 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 80/238 (33.61%), Postives = 118/238 (49.58%), Query Frame = 3
Query:  189 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAAHLVKNGPLAVAINA 884
            H+ L+KK   K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +   +C ++ +  AA    +  +   +E  +   + + GP++VAI+A
Sbjct:   25 HWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.136e-26
Identity = 80/238 (33.61%), Postives = 118/238 (49.58%), Query Frame = 3
Query:  189 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAAHLVKNGPLAVAINA 884
            H+ L+KK   K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +   +C ++ +  AA    +  +   +E  +   + + GP++VAI+A
Sbjct:   25 HWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.758e-26
Identity = 77/238 (32.35%), Postives = 116/238 (48.74%), Query Frame = 3
Query:  201 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT----QFSDLTPAEFRRTYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +K K+NK+Y+ +EE  +R  +++  L+      + +    +G T    +F D T  EFR+  + +        K  + ++A          LP   DWR+KG V PV+ QG C +CW+F+ TGA+E      TGKL  LS Q LVDC            ++GC GG   +AF+Y L  GGL  E  YPY G D    C+++     A +  F  +   ED + A +   GP+   I+A
Sbjct:   32 WKIKYNKSYSLKEEKLKR-VVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSI-------LPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD--GPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDA 252          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.116e-26
Identity = 83/245 (33.88%), Postives = 122/245 (49.80%), Query Frame = 3
Query:  165 NDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLR--RAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            +D +   + ++ +K K+N+ Y +Q +   R+ +F  NL   RA      + + T  + QF+D++  EF +TYL L+    +P+ A   A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   +   LSEQ LVDC    D       + GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F    +D     A  ++   +AVA++A
Sbjct:   17 SDEIDTANLYANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLK----VPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFK--DIDSCDELAQTIQERTVAVAVDA 245          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.060e-25
Identity = 78/237 (32.91%), Postives = 118/237 (49.79%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAAHLVKNGPLAVAINA 884
            + L+KK ++K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+         D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  +  G+  E+ YPY G D   +C ++ +  AA    +  +   +E  +   + + GP++VAI+A
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 251          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.384e-25
Identity = 73/183 (39.89%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  342 DLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLV-KNGPLAVAINA 884
            D+T  E  RT  GLR     P+      +   ++  PA  DWR KG V PVKDQG CGSCW+FS+ GALEG     TGKL+SLS Q LV C          S ++GC GG M +AFEY     G+  E+ YPY G D   +C +  +  AA    +  +  D ++     V + GP++V I+A
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQD--ESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDA 256          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.808e-25
Identity = 76/231 (32.90%), Postives = 116/231 (50.22%), Query Frame = 3
Query:  192 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLVKNGPLAVAINA 884
            F  +    NK +A++ E+  RF +F  N      ++ ++ +A   +  F+D+T  EF +T+LG+  ++       +A +      P   DWR    + P KDQG CGSCW+F TT  LEG      GKL S SEQQLVDCD         + D+GC GG  +++ ++  +  GL  E DYPY        CK  K+ +A    +  V    E  +   + +NGP+AV ++A
Sbjct:   18 FKQWAATHNKVFANRAEYLYRFAVFLDN------KKFVEANANTELNVFADMTHEEFIQTHLGMTYEVPETTSNVKAAVKAA---PESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD---------ASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAV--AGTCKKVKN-VATVTGSRRVTDGSETGLQTIIAENGPVAVGMDA 225          
BLAST of FC877845 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.362e-25
Identity = 78/230 (33.91%), Postives = 116/230 (50.43%), Query Frame = 3
Query:  234 QEEHDRRFTIFKANLRRAARRQKLDP----SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---------LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAHLV-KNGPLAVAIN 881
            Q+E++ R  IF++N     R  K       S T  +   +DLT  EF      +R  LRLP   D      T++         LP   DWR KGAV PV++QG CGSC++F+T  ALE  +   TG+L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT++   C++ +S    +   F+ +   ++    H V K GP+ V I+
Sbjct:  104 QKENNFRMAIFESNELMTERINKKYEQGLVSYTTALNDLADLTDEEFM-----VRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTEQ--RCRWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGIS 318          
The following BLAST results are available for this feature:
BLAST of FC877845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATK_PIG1.635e-2633.76Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATJ_RAT1.635e-2632.33Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATK_MACMU2.136e-2633.61Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA2.136e-2633.61Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATR_MOUSE4.758e-2632.35Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL1_PARTE8.116e-2633.88Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_RABIT1.060e-2532.91Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_CHICK1.384e-2539.89Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
ACP1_ENTHI1.808e-2532.90Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATL_BRUPA2.362e-2533.91Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA65DB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA65DB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877845 ID=FC877845; Name=FC877845; organism=Citrus clementina; type=EST; length=893bp
CATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCT
CTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGA
TCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACC
ACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTA
TTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCG
TAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGA
AGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACT
CCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCT
GCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGG
CGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAG
GGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGG
TGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGC
TTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGAT
TCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAA
GGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATC
GTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCC
AACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCCATCTTGT
GAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATG
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